KEGG   Candidatus Protochlamydia naegleriophila: PNK_0393
Entry
PNK_0393          CDS       T04212                                 
Symbol
nfo
Name
(GenBank) endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
pnl  Candidatus Protochlamydia naegleriophila
Pathway
pnl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pnl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PNK_0393 (nfo)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pnl03400]
    PNK_0393 (nfo)
Enzymes [BR:pnl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     PNK_0393 (nfo)
DNA repair and recombination proteins [BR:pnl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     PNK_0393 (nfo)
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: CUI16025
UniProt: A0A0U5J7G5
Position
cPNK:495647..496498
AA seq 283 aa
MTSENILIGAHTSAAGGVHRALLEGKQIGATTIQFFTSNQKQWKGRQFTSDDLAIWQRTL
QETGLQHLMSHDSYLINLGCPNAENLEKSRKAFQEEVIRCVQLGVNYLNFHPGASLGEDV
QKCLDCIIESLLLIKPLVEQGKTRLLLEATAGQGSSVGHRFEQLAYIIQGVQDHIPIGVC
IDTCHIFVAGYDIRTAEAWDQTLKEFDKVVGLSHLYAFHVNDSMKDLGSRVDRHAELGEG
KIGWSSFQFLMTDPRTRHLPKYLETPGGPAFWEKEIQKLKGFV
NT seq 852 nt   +upstreamnt  +downstreamnt
atgacttctgagaacattctcatcggcgctcatacgtctgcagctggtggagtccaccga
gctttgttggaaggcaagcaaattggggccacgaccattcaattttttacaagtaatcag
aagcagtggaaagggcgtcagtttacttcagacgacttagctatttggcaaagaacattg
caagagactggtttacagcacttgatgagtcatgatagctatttgatcaatttaggatgt
cctaatgccgaaaatctggaaaaaagccgtaaagcttttcaagaagaagtgattagatgt
gtacaattgggagtgaactacttgaatttccatccaggagcttctcttggggaagatgtt
caaaagtgtttggactgcattattgagagcctattgcttattaagcctcttgtcgagcaa
ggcaagacacgccttttattagaggccactgcaggacagggctcatcggttgggcatcga
ttcgagcagctagcttacatcattcaaggcgtgcaagaccacattccaatcggcgtctgc
atcgatacgtgtcacatttttgtggcgggttatgatatcaggacagcagaggcttgggat
cagacgctcaaagaatttgataaagttgttggtctctctcatctttatgcctttcatgtc
aacgattcaatgaaggaccttggatcgcgcgttgaccgccatgcagagcttggcgaaggc
aaaattggctggagcagcttccagtttttgatgaccgaccctcgtacgcgtcatttacct
aaatatcttgagacccctggagggcctgcgttctgggaaaaagaaattcaaaagcttaaa
gggtttgtttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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