KEGG   Parastagonospora nodorum: SNOG_00354
Entry
SNOG_00354        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K03681  exosome complex component RRP40
Organism
pno  Parastagonospora nodorum
Pathway
pno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SNOG_00354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pno03019]
    SNOG_00354
Messenger RNA biogenesis [BR:pno03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     SNOG_00354
SSDB
Motif
Pfam: RRP40_S1 Rrp40_N KH_6
Other DBs
NCBI-GeneID: 5968350
NCBI-ProteinID: XP_001791044
UniProt: Q0V6L0 A0A7U2HWP2
Position
Unknown
AA seq 238 aa
MATLVLPGDEIPPHALPTGTGKRKTLKLGPGLRHIPPSTVVTTVAGALVTDNKKNAASVE
TNSGRYIPYPNDLVIATVNNSTGESFNCLLSPHTPFAALPHLAFEGATKKTRPQLPPNSL
IYTRIVSCPRDSAPELTCVDPATGKSEGLGLLKGGMVFPISLGMARRLLAPKEELVLLEE
LGKKIGFEITVGRNGVVHVDAGSVGRTLAVGKALQRVDEEAVGEAGQRKMVGEILKKI
NT seq 717 nt   +upstreamnt  +downstreamnt
atggcaacactcgttctgcctggcgacgagatcccacctcatgcgctgccaactggcacc
gggaagcgcaagacattgaaacttggccccggactgcgacacatcccacccagcaccgta
gtaacaaccgtcgcgggcgcactggtgaccgacaacaagaagaacgcagcatccgtagaa
accaacagcggtcgatacatcccctaccccaacgacctcgtcatcgccacggtcaacaac
tccaccggcgaatccttcaactgcctgctctccccgcacacccccttcgccgccctcccg
cacctcgccttcgaaggcgccacaaaaaagacccgcccgcaacttccccccaactccctc
atctacacgcgcatcgtctcctgcccgcgcgacagcgcgcccgaactcacctgcgtggac
ccggcgactggaaagtccgaaggactaggcctactcaagggcggcatggtgttcccaatt
agtctgggcatggcgaggagattgttggcgcccaaggaagaattggtgttgctggaggag
ctgggcaagaagattgggtttgagattacggtgggcaggaacggggttgtgcatgttgat
gcggggagtgtgggcaggacgttggcggtgggcaaggcgcttcagagagtggatgaggag
gccgtgggcgaagcgggccagaggaagatggtgggcgagattttgaagaagatttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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