KEGG T04226: AT302

Pandoraea norimbergensis: AT302_24005

Entry

AT302_24005       CDS       T04226

Name

(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

pnr Pandoraea norimbergensis

Brite

KEGG Orthology (KO) [BR:pnr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pnr03009]
    AT302_24005
Enzymes [BR:pnr01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     AT302_24005
Ribosome biogenesis [BR:pnr03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AT302_24005

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_25 Methyltransf_31 Cons_hypoth95 Met_10 Methyltransf_23 Methyltransf_11 Methyltr_RsmB-F Methyltransf_15 MTS RrnaAD Methyltransf_32 Phage_stabilise TRAM Ubie_methyltran

Other DBs

NCBI-ProteinID:

ALS63516

UniProt:

A0A0U2YA25

Position

complement(3631245..3632702)

AA seq 485 aa
MEARGVGRTAPEGEPGTPEYKPGKVIFVEGALPGERVKYLSYRRKPKFEQADTLEVLRSS
SIRAKPQCPHFGKCGGCSMQHLEPRAQIAIKQRVLEDNLARLGKVKAETMLRPIQGPDWG
YRFRARLTVRYVPKKGGVLIGFHERKSSYVADMDSCEVLPRRISDMLVPLRRLVESLSIR
ERLPQIELAIGADVTALVLRILEPLTPADEDILRTFADANAVQFWLQTKGPDTAVPFYPL
APELHYTLPEYQIRMPFKPTDFTQVNHQINRVLVHRALRLLAPESTERVLDLFCGLGNFT
LPLARRAGTVMGIEGSTALTERALANAERNGVAAHTEFACRNLFDITAEDIRALGAFDRY
LIDPPREGALAVSKALAELAQQGYEGLPKRIVYVSCSPATLARDAGLLVHEAGYRLTQAG
VVNMFPHTSHVESMAVFEHESIGQPWVPLVRVSEADADAQAGEADVGVEAIAGAVDGDGV
IHEDV

NT seq 1458 nt +upstreamnt +downstreamnt
atggaagcgcgcggcgttggccgcaccgctcccgaaggtgaacctggcacgccggaatac
aaacccggcaaagtcatcttcgtcgaaggtgcgctgcccggggagcgtgtcaaatacctg
agctatcgccgcaaacccaagttcgaacaggctgacacgctggaagtgctgcgttccagc
tcgatccgtgccaagccgcaatgtccgcatttcggcaaatgcggcggctgctcgatgcag
catctggagccgcgcgcccagatcgccatcaagcaacgtgtgctcgaagacaatctggcc
cgtctgggcaaggtcaaggccgagacgatgctgcgcccgattcaggggccggactgggga
tatcgtttccgtgcccgcctgacggtgcgctacgtgcccaagaagggtggtgtgctgatt
ggcttccacgaacgcaagagcagctacgtcgccgatatggattcgtgcgaagtgctgccg
cgacgtatttccgacatgctggtgccgctgcgccggttggtcgagtcgctgtcgattcgg
gagcgcctgccgcagatcgagctggccatcggtgccgacgtgacggccctcgtgctgcgt
attctcgagccgctcacgccggcggacgaggatattctgcgcacgtttgccgatgcgaac
gcggtccagttctggttgcagaccaaggggccggacaccgcggtgccgttctatccgctg
gcgccggaactgcactacacgctgccggaataccagatccggatgccgttcaagccgacg
gacttcacacaggtcaatcaccagatcaatcgggtgctcgtgcaccgtgcgctgcgactg
ctcgcgcctgagtcgaccgagcgcgtgcttgatctgttctgcggtctgggcaacttcacg
ctgccgctcgcacgtcgtgccggcacggtgatgggtatcgaaggcagcacggcgctgacc
gagcgcgcgctcgccaatgccgagcgcaacggtgtcgcggcacacacggaattcgcctgc
cgcaacctgttcgacatcacggcggaggacatccgcgcgctgggcgctttcgaccgctat
ctgatcgatccgccgcgcgaaggtgcactcgccgtatcgaaggcgctcgccgagttggcc
cagcaaggctatgaagggctgcctaagcgtatcgtctatgtgtcgtgcagcccggcaacg
ctggcgcgcgacgcgggcctgctggtgcacgaagcgggctatcgcctgacgcaggcaggg
gtggtgaacatgttcccgcacacgtcgcacgttgagtcgatggccgtgttcgagcatgag
agcatcggtcagccgtgggtgccgcttgtgcgcgtgtccgaggcagatgcggacgcccag
gcgggcgaggctgacgtgggtgtggaagccatcgccggtgcggtagacggtgacggcgtg
attcacgaagacgtctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (24)   

Download RDF

DBGET integrated database retrieval system