KEGG   Polaribacter sp. BM10: BXQ17_03440
Entry
BXQ17_03440       CDS       T04746                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
pola  Polaribacter sp. BM10
Pathway
pola03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pola00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BXQ17_03440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pola03019]
    BXQ17_03440
   03009 Ribosome biogenesis [BR:pola03009]
    BXQ17_03440
Enzymes [BR:pola01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BXQ17_03440
Messenger RNA biogenesis [BR:pola03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BXQ17_03440
Ribosome biogenesis [BR:pola03009]
 Prokaryotic type
  rRNA helicases
   BXQ17_03440
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_19 Helicase_RecD HAD_2
Other DBs
NCBI-ProteinID: AQS93188
UniProt: A0A1U9L5E6
Position
complement(801167..802498)
AA seq 443 aa
MLKQFSELGINNELQKGLIDLEISKPTEIQEKVIPIALNNSEDIVALAKTGTGKTAAFGL
PLLQLIDTDNSNIQAVILAPTRELGQQIASNLEAYAKFCSSISIATICGGIPIKPQIERL
KKPTQIVVATPGRLADLVKREAINIKNISYFILDEVDEMVSALKEGLDNIIKEIPKNRRT
FLFTATMPGSIRQMVNNYMSKNVVQIEANMATMGHQGINHKYVVVEPIEKLEVLLHFLNS
KSGKRGIIFCKTKAAVNKLAKKLAINKFSSGALHGSLTQGIRDRIMDQFREGHIDTLVAT
DLAARGIDVKDLAYVVNYHLPDTYDAYVHRSGRTARAGASGLSLSIIQKEEEEDITDFER
ELDIRFDTFKKADAKSIEENNALVWANKIFKTKPNRSIDEDFKAQIKTIFHHLTKDELVD
KILANYLANTKNSASETTKNKRK
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgttaaaacagttttccgaattaggaattaataatgaattacaaaagggtttaatagat
ttagaaatttctaagcctacagaaattcaagaaaaagtgattcctattgcattaaataat
agtgaagacatagttgctttggctaaaactggtactggtaaaacagctgcttttggcttg
ccattattacaattaatagataccgataattccaatatacaagctgtaattttagcacct
acaagagagttaggccaacaaattgcctctaatttagaagcttatgctaaattttgctct
tcaatttctattgctactatttgtggcggaataccaataaaaccacagatagaacgttta
aaaaaaccaactcaaattgttgttgcaactcctggtagacttgcagaccttgtaaaaaga
gaagcaataaacataaaaaatatttcttactttattctagatgaagtagatgaaatggtt
agcgctttaaaagagggtttagacaatatcattaaagaaattcctaaaaatagaagaact
ttcctttttacagctacaatgccaggttctattagacaaatggtaaataactacatgtct
aaaaatgttgttcaaattgaagcgaatatggctacaatggggcatcaaggaattaatcat
aaatatgtagttgtagaaccgatagaaaaattagaggttttacttcattttttaaattct
aaatcgggcaaaagaggtataattttttgtaaaactaaagctgcagtaaataaattagcc
aaaaaattagcgataaataaattttcttctggtgcgttacacggtagtttaactcaagga
attagagatcgaataatggatcaatttagagaaggacatattgatacattagtagctaca
gatttggctgccagaggtatcgatgttaaagatttagcgtatgttgtaaattaccattta
ccagatacgtatgatgcttatgttcacagaagtggaagaacggctagggcaggagctagc
ggattatcgttatctatcattcaaaaggaagaagaagaagatattacagattttgaaaga
gaattagacattaggttcgatacttttaaaaaagcagatgctaaaagtattgaagaaaat
aatgctttagtttgggcaaataaaatttttaaaacaaaacctaaccgttctatagatgaa
gattttaaagctcaaattaaaaccatatttcaccatttaactaaagatgaattggtagat
aaaattttagcaaactatttagctaatacaaaaaacagtgcatcagaaaccacaaaaaac
aaaagaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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