KEGG   Pongo abelii (Sumatran orangutan): 100456237
Entry
100456237         CDS       T01416                                 
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon03022  Basal transcription factors
pon03420  Nucleotide excision repair
pon05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:pon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100456237
  09124 Replication and repair
   03420 Nucleotide excision repair
    100456237
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100456237
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pon03021]
    100456237
   03400 DNA repair and recombination proteins [BR:pon03400]
    100456237
Transcription machinery [BR:pon03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     100456237
DNA repair and recombination proteins [BR:pon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     100456237
SSDB
Motif
Pfam: Ssl1 VWA_2 C1_4 VWA HscB_4_cys VWA_3
Other DBs
NCBI-GeneID: 100456237
NCBI-ProteinID: XP_002815673
Ensembl: ENSPPYG00000015531
UniProt: A0A6D2XLR1
Position
5:67521772..67554139
AA seq 395 aa
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELKDQHVYVC
AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPAPSGV
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggatgaagaacctgaaagaactaagcgatgggaaggaggctatgaaagaacatgggag
attcttaaagaagatgaatctggatcacttaaagctacaatagaagacattctattcaag
gcaaagagaaaaagagtatttgagcaccatggacaagttcgacttggaatgatgcgccac
ctttatgtggtagtagatggatcaagaacaatggaagaccaagatttaaagcctaataga
ctgacgtgtactttaaagttgttggaatacttcgtagaggaatattttgatcaaaatcct
attagtcagattggaataattgtaactaaaagtaaaagagctgaaaaattgactgaactc
tcaggaaacccaagaaaacatataacgtctttgaagaaagctgtggatatgacctgccat
ggagagccatctctttataattccctaagcatggctatgcaaactctaaaacacatgcct
ggacatacaagtcgagaagtactaatcatctttagcagccttacaacttgcgatccatct
aatatttatgatctaatcaagaccctaaaggcagctaaaattagagtatctgttattgga
ttgtctgcagaagttcgcgtttgcactgtacttgctcgtgaaactggtggcacataccat
gttattttagatgaaagccattacaaagagttgctcacacatcatgttagtcctcctcct
gctagctcaagttctgaatgctcacttattcgtatgggatttcctcagcacaccattgct
tctttatctgaccaggatgcaaaaccctctttcagcatggcgcatttggatggcaatact
gagccagggcttacattaggaggctatttctgcccacagtgtcgggcaaagtactgtgag
ctacctgttgaatgtaaaatctgtggtcttactttggtttctgctccgcacttggcacgg
tcttaccatcatttgtttcctttggatgcttttcaagaaattcccctagaagaatataat
ggagaaagattttgttatggatgtcagggggaattgaaagaccaacatgtttatgtttgt
gctgtgtgccaaaatgttttctgtgtggactgtgatgtttttgttcatgattctctacac
tgttgccctggctgtattcataagattccagctccttcaggtgtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (6)   
   Pfam (6)   
All databases (37)   

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