KEGG   Populus trichocarpa (black cottonwood): 18103250
Entry
18103250          CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC18103250 isoform X1
  KO
K07767  katanin p60 ATPase-containing subunit A1 [EC:5.6.1.1]
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pop04812]
    18103250
Enzymes [BR:pop01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     18103250
Cytoskeleton proteins [BR:pop04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     18103250
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_22 AAA_24 TIP49 AAA_16 AAA_14 AAA_5 nSTAND3 Mg_chelatase AAA_28 AAA_2 IstB_IS21 AAA_18 AAA_33 NACHT RNA_helicase AAA_7 Parvo_NS1 AAA_17 AAA_25 DUF815 Vps4_C bpMoxR ABC_tran NB-ARC PhoH AAA_19 TsaE AAA_3
Other DBs
NCBI-GeneID: 18103250
NCBI-ProteinID: XP_006377613
UniProt: A0A3N7FR19
Position
11:complement(9769100..9776444)
AA seq 405 aa
MADEPSLTRWSFQDFKIFYDDKFGRKKVAAATAQTSSESQQNGQTTAVASNGNGHVKNLS
DMAVYEQYRNQDRSSTLHSNGVLPNGINEIPQKPLIPAFDSSETRALAESLCRDIIRGSP
NVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVAT
ECKTTFFNISASSVVSKWRGDSEKLIKVLFELARHHAPSTIFLDEIDAIISQRGEASSEH
EASRRLKTELLIQMDGLTRTKELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRT
MFEELLPSQPDEDMLPYDLLVERTEGFSGSDIRLLCKEAAMQPLRRLMTLLEDREEIVPD
DELPKVGPLRSEDIETALKNTRPSAHLHAHRHEKFNSDYGSQILQ
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggccgatgaaccttctctcactcgctggtcttttcaggattttaaaatattttatgat
gataagtttgggagaaagaaggtggctgcagcaacagcacaaacatcatcggagtcgcag
caaaacggtcaaacaacagcagtagcatcgaatgggaatggtcatgtcaagaacctatct
gatatggccgtttatgagcagtatagaaaccaagataggagctcaacattgcactccaac
ggagttttgcctaatggaattaatgaaatacctcagaagcctttgattcctgcttttgat
tcttctgaaacacgcgctttagcagagagtttatgcagggatatcattcgcggcagtcca
aatgtgaagtgggaaagcattaaggggttagagaatgcaaaacgtttactgaaagaagct
gtagtcatgccgataaaatatcccaaatatttcactggtcttctgtcgccatggaaaggc
attcttctttttggccctccagggacagggaagacaatgctcgcaaaggctgttgctaca
gagtgcaaaaccacatttttcaatatctcagcatcttcagtggttagcaaatggcggggt
gattcagagaaattaataaaggttttatttgagcttgctaggcatcacgcaccatcaact
atatttcttgatgaaattgatgctattatcagtcaacgtggtgaagctagcagtgagcat
gaagcaagtaggcgtttgaagactgaactgctcatacagatggatggtttgactcgcaca
aaggagcttgtttttgttttggcggcgactaatctcccttgggaattggatgcggccatg
ctccggcgtcttgagaagcgaattcttgtaccccttccagaaccagaagctagaagaacc
atgtttgaagaacttctcccatcacagcctgatgaggacatgcttccttatgatttatta
gtggaaagaacagaaggattttctggttcagatatccggctattatgcaaagaggctgcc
atgcaaccattgagacgcttaatgacactccttgaagacagagaggaaatagtgcctgat
gatgagttgccaaaagttgggccgctcagatctgaggatatagagacagctttgaagaac
acaaggccatctgctcatcttcacgcccatcgccatgagaaattcaattctgattacggc
agtcagatactccaatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (31)   
   Pfam (31)   
All databases (49)   

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