KEGG   Populus trichocarpa (black cottonwood): 18107657
Entry
18107657          CDS       T01077                                 
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    18107657
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pop01007]
    18107657
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pop03016]
    18107657
Enzymes [BR:pop01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     18107657
Amino acid related enzymes [BR:pop01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   18107657
Transfer RNA biogenesis [BR:pop03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    18107657
 Prokaryotic type
    18107657
SSDB
Motif
Pfam: tRNA_synthFbeta PhetRS_B1 B5 B3_4 EAD7
Other DBs
NCBI-GeneID: 18107657
NCBI-ProteinID: XP_006371952
UniProt: B9N5I6
Position
18:complement(8449796..8459146)
AA seq 595 aa
MPTVSVGRDRLFAALGKSYTQEEFEDLCFKFGIELDDVTTEKAIIRKERHLDEEDEEVGD
DEEIIYKIEVPANRYDLLCLEGIAQALRIFNEEEQTPTYTLANITQDSMLKMHVQPETSL
IRPFVVCAVLRDITFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEAL
HPENINFVPLKQEKNFRADELMEFYKSDMKLKKFLHIIENSPVYPIIYDSKRTVLSLPPI
INGAHSAITLKTKNVFIECTATDLTKASIVLNTMVTTFSAYCQRKFEVEPVKVIYSDGKS
YVYPDLSVYNMEVPLSYITGSIGVSLAAEKVTSLLNRMQLRAEHSVFDDNKCNINVLIPP
TRSDVLHPCDVMEDVAIAYGYNDIPKRRLPSMKPLPLNQLEDLIRAEIAMNGFTEVLTWI
LCSYRENFASLNREDDQSSAVIIGNPRSSDFEVVRTSLMPGALKIIGHNKDHPKPIKIFE
VGDIALLDESKDVGATNRRHLAALYCGTNSGFELIHSLVDRIMEVMGTPFVPIGDNTGYY
IERSNEPEFLPGRQASIIYKGKHFGNFGIVHPQVLNNFVITDPCSFLEIDIEHFL
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgccgaccgttagcgtggggagagatcgtttgttcgcagccctagggaaatcttacaca
caagaagagtttgaggatttgtgcttcaagttcggtatcgagctcgacgatgtgactact
gagaaagcaattattagaaaagagaggcacttggatgaagaggatgaagaagtaggtgat
gatgaagaaatcatttacaaaattgaagttcctgctaacagatatgatttgctatgcctt
gaggggatcgctcaagccctccgcatttttaacgaggaggagcagacgcccacatataca
cttgccaacattacacaagactcaatgcttaagatgcatgtccaaccagagacatccttg
attcgtccctttgtggtttgtgctgttctgagagatattacatttgatgaagcaagttac
aatagcttcattgatctccaagataagcttcatcaaaacatttgtaggcggagaacccta
gttgcaattgggactcacgacttggatacattacaaggccctttcacttatgaggctttg
catcctgaaaacataaattttgtaccactgaaacaggagaaaaacttcagagctgatgag
ctgatggagttttacaagtctgatatgaagctgaagaagttcttacacataattgagaat
tcaccagtgtatcccatcatatatgattctaaaagaactgttttatctctaccaccaatt
attaatggtgcacattcagctatcactctgaagactaagaatgttttcattgaatgcaca
gccactgatctgacaaaggccagtattgttttgaacacaatggtaacaactttttcagca
tattgtcaaagaaaatttgaggtggaacccgttaaagtgatatattctgatggaaagtca
tacgtctaccctgatttatctgtctataacatggaagttcctctttcatatatcactggc
tcaattggagtctctttggcggctgaaaaggtcactagtttattaaatcggatgcaattg
cgtgctgaacattccgtatttgatgacaacaaatgcaatatcaatgtattaatacctcca
acaagaagtgatgttcttcacccttgtgatgttatggaggatgttgcaattgcatatggg
tataatgacattccgaagagaaggctgccatccatgaagccactgcccctgaatcagctt
gaggatcttatcagagcagagattgcaatgaatgggtttacagaggtcttaacatggatt
ttatgctcttatcgagagaattttgcctcattaaatcgagaagatgatcaatcaagtgca
gtgattattggaaatccccgttcctcggattttgaggttgtccgaaccagcctcatgcct
ggtgctttgaaaattatcggacataacaaagaccatcctaagccaatcaagatttttgaa
gtgggtgacatagccctattggatgagagtaaagatgttggtgcaacaaaccgtcgccat
ctcgcagctttgtattgtggcacaaactcaggatttgagcttattcactctttggtggac
agaatcatggaagtgatgggaacccctttcgtcccgattggtgacaatacaggttactac
atagagcggtcaaatgaacctgaatttcttccgggtagacaagctagcatcatttacaaa
gggaagcattttggcaattttggtattgtgcacccccaggtcttgaacaacttcgtcatt
actgatccatgttccttcttggaaatcgacattgagcatttcttgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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