KEGG   Populus trichocarpa (black cottonwood): 7485188
Entry
7485188           CDS       T01077                                 
Name
(RefSeq) transcription factor MYB54
  KO
K09422  transcription factor MYB, plant
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pop03000]
    7485188
Transcription factors [BR:pop03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters Myb, Myb-factors
    7485188
SSDB
Motif
Pfam: Myb_DNA-binding Myb_DNA-bind_6 DUF3871 Myb_DNA-bind_7
Other DBs
NCBI-GeneID: 7485188
NCBI-ProteinID: XP_002318324
UniProt: B9I4W4
Position
12:3516416..3518365
AA seq 243 aa
MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPFT
EEEEERLLASHRIHGNRWAIIARFFPGRTDNAVKNHWHVIMARRYRERSRLHAKRAAQTL
VNDNKLSSKQDHMHMDCETRNFSSFSKKYCEKYGQYPMVTHSYLPAFCKEFYNEDPSHCE
DQSRPIEFYDFLQVNTDSNKSEVIDNARRDDEEVDQQEALENNQSKADVPFIDFFSVNGK
SSS
NT seq 732 nt   +upstreamnt  +downstreamnt
atgtgcactagaggacattggaggcctgctgaggatgagaaacttaaggaattggttgaa
aagtatggtcctcataattggaacgccattgccgaaaagcttcaaggaagatcagggaag
agttgtaggttgagatggtttaatcagctggatccaagaatcaatagaagcccgtttaca
gaagaggaagaagaaagactacttgcttcccacaggattcatgggaatagatgggcaatt
attgcaagatttttccctggtcgcaccgataatgcagtgaagaatcattggcatgtcatc
atggcaagaagatatagagagaggtctagacttcatgcaaaaagggctgctcaaactttg
gtaaatgataacaaattatcctcaaaacaagatcacatgcacatggattgtgagacgagg
aatttttcttcattttccaagaaatattgtgaaaaatatggccaatatcctatggttact
cacagctacttaccggccttttgcaaagagttctacaatgaagatccaagtcattgtgaa
gatcaaagtcggccgattgagttttatgattttctccaagtaaacactgactccaataaa
agtgaagtgatagacaatgcaagaagagatgatgaggaggtagatcagcaggaagccttg
gaaaataatcagagcaaggctgatgttccattcattgattttttctctgttaatggcaaa
tcctcatcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system