KEGG   Pseudomonas oryzihabitans: APT59_21640
Entry
APT59_21640       CDS       T04267                                 
Name
(GenBank) type VI secretion protein
  KO
K11900  type VI secretion system protein ImpC
Organism
por  Pseudomonas oryzihabitans
Pathway
por02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:por00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    APT59_21640
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:por02044]
    APT59_21640
Secretion system [BR:por02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   APT59_21640
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: ALZ86688
UniProt: A0A0U4VTU5
Position
4754609..4756096
AA seq 495 aa
MTTMTDTLLQQHPAHSAADSGILDRIIAETRLAPHDEGYGVARRGISAFIEELLKPHNAQ
QPVKKALVDRMIAEIDEKLSRQVDEILHHEAFQSLEAAWRGLRLLVDRTDFRENNRIEML
SVSKQDLLEDFEDSPDIVQSGLYKHVYTAEFGQFGGEPVGAIIANYDFDPTAPDIRTLQQ
VAAVSAMAHAPFIAAAGPRFFGLESFTGLPDLKDLKDHFDGPQFAKWQSFREQEDARYIG
LTLPRFLLRTPYDPEENPVKTFAYRENVSQSHGHYLWGNTAYAFATRLTHSFAKYRWCPN
IVGPQSGGAVEDLPLHHFESMGEIETKIPTEVLISDRREYELADAGFIALTMRKGSDNAA
FFSACSTQKPKVYGNSEEGRAAELNYKLGTQLPYLFIVSRLAHYLKVLQREQLGGTKERT
DLELELNKWIRQFVADQENPSAEVRGRRPLRSASIRVSDVEGNPGWFRVGLSVRPHFKYQ
GADFTLSLVGKLDKE
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgaccaccatgaccgataccctgctccagcagcatcctgcccacagcgccgcagacagc
ggcattctcgatcgcatcatcgccgagacccgcctggcgccccatgacgaaggctatggc
gtagccaggcgcggcatctccgccttcatcgaggaattgctcaagccgcacaatgcccag
cagccggtaaagaaggcgctggtcgaccggatgatcgcggagatcgacgagaagctcagc
cggcaggtcgacgagatcctgcaccacgaagcgttccagtccctggaagccgcctggcgc
ggcctgcgtctactggtggaccgtaccgacttccgcgaaaacaaccggatcgagatgctc
agcgtttccaagcaggatctgctggaagatttcgaggactccccggacatcgtccagtca
ggcctctacaagcacgtctacacggccgaattcggtcagttcggcggcgagccggtcggc
gctatcatcgccaactacgacttcgaccccaccgcgccggacattcgcaccctgcaacag
gtggcggcggtctcggccatggcccatgcgcccttcattgctgcggccgggccacgcttc
ttcggcctggaaagctttaccggtctgcccgacctgaaggatctcaaggatcacttcgat
ggtccgcaattcgccaagtggcagagtttccgggagcaggaagacgcccggtatatcggc
ctgaccctgccacgctttctgctgcggacgccctatgatccggaggagaatccggtcaag
accttcgcctatcgcgagaacgtcagtcagagccacggccattatctctggggcaatacc
gcctacgccttcgccacccgcctgacccacagcttcgccaagtaccgctggtgcccgaac
atcgttggcccccaaagcggcggcgccgtcgaggacctgccgctgcatcacttcgagagc
atgggtgagatcgagaccaagatccctaccgaggtgttgatttccgatcgccgcgaatac
gaactggccgatgccggcttcattgccctgaccatgcgcaagggcagcgacaacgccgcc
ttcttctccgcctgctcgacgcagaagcccaaggtctacggtaatagcgaagaaggtcgc
gccgccgagctgaactacaagcttggcacccagttgccctatctgttcatcgtcagccgc
ctggcgcactacctgaaagtactgcagcgcgagcaactgggcggcaccaaggaacgtacc
gatctcgaactggaactcaacaaatggatccgccagttcgttgccgaccaggagaatccc
agcgccgaggtgcgcgggcgccgaccgttgcgctcagccagcattcgcgtcagcgatgtc
gagggcaacccgggctggttccgcgtgggtctgagtgtgcggccgcacttcaagtatcag
ggcgccgatttcaccctgtcgctggtcggcaagctggacaaggagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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