KEGG   Komagataella phaffii: PAS_chr3_0851
Entry
PAS_chr3_0851     CDS       T01092                                 
Name
(RefSeq) Subunit of a complex with Rad50p and Xrs2p (MRX complex)
  KO
K10865  double-strand break repair protein MRE11
Organism
ppa  Komagataella phaffii
Pathway
ppa03440  Homologous recombination
ppa03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PAS_chr3_0851
   03450 Non-homologous end-joining
    PAS_chr3_0851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppa03032]
    PAS_chr3_0851
   03400 DNA repair and recombination proteins [BR:ppa03400]
    PAS_chr3_0851
DNA replication proteins [BR:ppa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    PAS_chr3_0851
DNA repair and recombination proteins [BR:ppa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     PAS_chr3_0851
    BRCA1-C complex
     PAS_chr3_0851
   NHEJ (non-homologous end-joining)
    MRX complex
     PAS_chr3_0851
SSDB
Motif
Pfam: Mre11_DNA_bind Metallophos
Other DBs
NCBI-GeneID: 8200340
NCBI-ProteinID: XP_002493082
UniProt: C4R5R7
Position
3:1654645..1656714
AA seq 689 aa
MPHVDRILPGKDTLRLLLTTDNHVGYNELDPIVGDDSWKTFEEIMLLAKDRDVDMVLQSG
DLFHVNKPTKKSMYHVMRILRSNCYGEKPIEFELLSDPSLCLDNRGFNYPNYEDPNINVS
VPFFAISGNHDDATGDDNLSPLDVLSVSGLMNYFGRVVDNDNINVKPLLFQKGRTKLALY
GMSNIRDERMFKTFRDGRVTFSTPGIQTDSWFNLMCVHQNHVQHGARTAYLPENFLPTFL
DLVVWGHEHDCIPYPVPNPETGFDTLQPGSSVATSLSNGETLEKNVFILNIKGKDYSLEK
IPLKTVRPFVMKDISLTQLGLNPNSRNKKEVLDFMIDEINGLIEEAQKSWLDKQAENSSS
VDDSEVDTPLPLVRLRVEYSGGFEVENPRRFSNRFVGKVANVNDIVIFHRKKEHTTGATR
TKPNLKNGEEHLELDELNISKLVDTFVDDNQLNLLNKKDVGSVVKAFVEKDDKAALKTFI
DEELSKDLKLLMGLSHGEHIEDESISQKKSFNKILKDIKKEKSQALMSKICTDSIKHIPE
SLPERPAFLRSITGPDRDSEDAQPKLTNRKISPSVTKKRVSKPSIQSIVSSESEILSEEL
DDFIDDDIDEDMDINSNSESDIDDFIDVPPPKKTRQTRAKAKTAPIAKPRATPKPKTKPK
PKPKPKPKTAKPKETGETLGSLIGNLSRR
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgccacacgttgacagaatactcccgggaaaggacacgttgcggcttctgttgacgaca
gacaatcatgtcggatacaatgagttggatccgattgttggggatgacagttggaagacc
tttgaagagataatgctgctagccaaagacagggatgttgacatggtgcttcaatcggga
gatctgtttcacgttaacaaaccgacaaagaaatcaatgtaccatgtgatgaggatcctg
aggtccaattgttacggagagaaacccatagagtttgagctactctcagatccttctctc
tgtctagataacaggggtttcaactaccctaactatgaagaccccaatataaatgtttct
gttccgttttttgccatttcgggcaatcatgacgatgctacaggtgacgacaacttgtct
cccttggacgttctaagcgtgagtgggttgatgaactattttggaagagtggtggacaat
gacaatattaatgtaaagcccttgttgtttcaaaaaggcagaaccaaactggctctttat
gggatgtccaatatcagggatgaaagaatgttcaagacatttagagatggaagggttaca
ttctctaccccaggtattcagactgattcatggttcaatctaatgtgtgtgcatcagaac
catgtccagcatggtgctagaactgcatatttgccagagaactttttgcctactttcttg
gaccttgttgtgtggggtcacgaacatgattgcataccttaccctgtccccaaccctgag
actggattcgacacgctacaaccgggctcctcagtggctacgtctttgtccaatggggag
acgctggagaaaaatgtgttcattctaaatataaaaggaaaagactattctttggagaag
attcctctgaagacagttagaccgtttgttatgaaagatatcagtctaactcaactggga
ctaaacccaaattccaggaataaaaaggaagttcttgattttatgattgacgagattaat
gggcttattgaagaagctcagaagtcatggttggataaacaagctgaaaactcttcaagc
gtagatgatagcgaggtagataccccattacctttagttcgtctaagggtggaatattca
ggcggctttgaagtggaaaaccccagaaggttttcgaatcggtttgttggtaaagttgcc
aatgtcaacgacatagtcattttccataggaagaaggagcatacaacgggggcaacccga
actaaacctaatttgaagaacggcgaggaacatttagagttagatgagttgaatatttct
aaacttgttgacacgtttgtggatgataatcagttgaatctactaaataagaaggacgtg
ggatctgttgtcaaagccttcgttgagaaagatgacaaggcggccttgaaaacattcata
gatgaagaattatccaaagacctcaaactgttgatgggtttaagccatggagaacacata
gaagatgagtcaatttcccaaaagaaatccttcaataagatattgaaggatatcaaaaag
gaaaagtctcaggcattgatgagcaaaatttgtacggactccattaaacacatcccggaa
agtttgccagaaagaccagcattcttaagatcaattactggaccggacagagactcagag
gatgcgcagcctaaacttacaaaccgcaaaatatcgccatctgtcacaaagaaacgcgtt
tccaagcctagcattcaatcgatagtttcttcagagtcagagatcctgtccgaagaatta
gatgatttcatagatgatgatattgatgaggacatggatatcaattcgaattccgagtca
gatattgacgatttcattgatgttcctccgccaaagaaaactagacaaaccagagcaaaa
gctaagactgcgcccatagctaaaccaagggccacgcccaaaccaaaaacaaaaccaaaa
ccaaaaccaaaaccgaaaccaaaaactgccaagcccaaagaaacgggagagactctggga
tctttgattggcaacctaagtagacgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (39)   

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