KEGG   Pseudomonas putida F1: Pput_2126
Entry
Pput_2126         CDS       T00537                                 
Name
(GenBank) protein of unknown function DUF877
  KO
K11900  type VI secretion system protein ImpC
Organism
ppf  Pseudomonas putida F1
Pathway
ppf02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:ppf00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    Pput_2126
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppf02044]
    Pput_2126
Secretion system [BR:ppf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Pput_2126
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: ABQ78265
UniProt: A5W2A5
Position
complement(2406272..2407762)
AA seq 496 aa
MPKPSSTAITTDATADTLSNATLLDQIMAETKLVPAQEGYQIARQGVSAFITEILKSNDP
DQLINKHRADQMIAEIDRMLGNQMDAILHQPEFQQLESSWRSLKLLVDRTDFRENIKLEV
LHVTKEDLLDDFENAADITCSGIYKHVYTAGYGQFGGEPVAAMVGNYNFGPSSPDIKLLS
YMASVGAMSHAPFLAAPAPEFFNLNSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHV
ALTGPRFMLRSAYHPQEQPIESFNYNEDIAGQHDNYLWGNSAFLLASCINDSFARYRWCP
NIIGPQSGGAVEDLPVHLYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNA
AFFSANSVQKPKHFPKTPEGLQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKER
RDLESELNKWIKQYVADQENPSADVRSRRPLRAARIEVSDVAGDPGWYQVSLAVRPHFKY
MGANFEISLVGRLDTQ
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgcccaagccaagcagcaccgccatcaccacagacgcaacggccgacacattgagcaat
gccaccctgctcgaccagatcatggcagaaaccaaactggtacctgcccaggagggctac
cagattgccaggcagggcgtatctgccttcatcaccgaaatactcaaaagcaatgaccca
gatcaactgatcaacaagcaccgagccgaccagatgattgccgagatcgaccgaatgctc
ggcaatcagatggatgccattctgcatcagcctgagttccagcagcttgaatcatcatgg
cgcagccttaaacttctggtcgaccgcacggacttcagggagaacatcaagcttgaagtc
ttgcatgtcacgaaagaggacctgctcgacgacttcgaaaatgctgctgacattacctgc
agcggtatctacaagcatgtttacaccgcgggttatggccaattcgggggagagccggtt
gcggccatggtaggcaactacaacttcggcccctcttcccctgacatcaagttgctaagt
tacatggcctccgttggcgccatgtcccatgccccttttcttgctgctcctgcccccgaa
ttcttcaatttgaacagcttcgaggagctgcctaacctcaaggaaataaaagacctcttc
gccggccctcggcatgccaagtggcgcgcttttcgtgaaagcgaagacgcccgccacgtc
gccctgaccgggccgcgcttcatgcttcgctccgcttaccacccgcaggaacaaccgatc
gagagcttcaactacaacgaagacatcgccgggcagcacgacaactacctgtggggcaat
tctgcttttctgttagccagttgcatcaacgacagcttcgcccgctaccgctggtgcccg
aacatcatcggcccccaatccggcggtgctgtcgaagacttgccggtccacctgtacgaa
tccctgggccagttgcaggccaagattcctaccgaggtgctgatatccgaccgcaaggaa
ttcgaactggccgaagagggcttcatcgccctgaccatgcgcaaagacagcgacaacgcc
gcgttcttctccgccaactcggtacaaaagcccaagcacttcccgaaaacccctgagggg
cttcaggcacagaccaactacaagctgggtacccagttgccctacctgttcatcgtcaac
cggctcgcccactacatcaaggtgctgcagcgcgagcagatcggcagttggaaagagcgc
cgtgaccttgagtccgagctgaacaaatggatcaagcagtacgtcgccgaccaggagaac
ccgtctgccgacgttcgcagccgccggccgctgcgtgccgcccgtattgaggtctcggat
gttgcgggtgacccgggctggtaccaggtttcgctcgccgtacgtccgcacttcaagtac
atgggcgcgaacttcgagatttccctggtcgggcggctcgatacgcaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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