KEGG   Pseudomonas putida GB-1: PputGB1_1256
Entry
PputGB1_1256      CDS       T00650                                 
Name
(GenBank) RNA methyltransferase, TrmA family
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
ppg  Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:ppg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppg03009]
    PputGB1_1256
Enzymes [BR:ppg01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     PputGB1_1256
Ribosome biogenesis [BR:ppg03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PputGB1_1256
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_25 Methyltransf_31 Cons_hypoth95 MTS Methyltransf_11 Methyltr_RsmB-F Methyltransf_23 Met_10 RrnaAD Methyltransf_15 PCMT Methyltransf_4 Ubie_methyltran PrmA TPMT DREV
Other DBs
NCBI-ProteinID: ABY97163
UniProt: B0KT45
Position
1403343..1404701
AA seq 452 aa
MSKKKTNSGLRFQPTGGNRSAQIPVGKKQRLDIERLAGDGRGIAFHEGRTWFVSGALAGE
AVEARVLNARGKVVEARLERLLQASPERREAPCRYYDRCGGCNLQHLPHQAQLALKQRTL
AEQLQRVAGVQPEEWAAPLSGPEFGYRRRARVAVRWDIKARQLEVGFRAEASQDIIAIDD
CAVLVQPLQSILRHLPTVLRSLNKPQALGHVELFSGTAEAVLVRHVAPLPAEDLARLQAF
CEQANAQLWLQGEGEPAPVDPAAQLGFALAPWQLELAWRPGDFVQVNAQVNTAMIEQALA
WLAPQADERVLDLFCGLGNFALPLARQAREVVAVEGVQAMVDRAAANARNNNVHNARFFQ
ADLSQPLAGTGWAAEGFSAVLLDPPRDGAFEVVQGIARLKASRLVYVSCNPATLARDAQV
LVGQGYRLKRAGILDMFPQTAHVEAMALFEAG
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtccaagaaaaaaaccaacagtggcctgcgcttccagccgaccggcggcaaccgcagc
gcccagattcccgtaggcaagaaacaacgcctggacatcgagcgcctggccggtgacggc
cgtggcatcgcgttccacgaagggcgcacttggttcgtcagtggtgccctggccggcgag
gccgtggaggcgcgcgtgctcaatgcccgtggcaaagtggtcgaggcccgcctcgagcgt
ttgctgcaggcaagccccgagcgccgtgaggcgccgtgccgctactacgaccgctgtggt
ggctgcaacctgcagcatctgccgcaccaagcgcagctggcgctcaagcagcgcaccctg
gctgagcaactgcagcgggtagccggcgtgcagcccgaggaatgggccgcccccttgagc
gggccggaattcggctaccggcgccgggctcgcgtggccgtacgctgggacatcaaggcg
cgtcaactggaggtaggcttccgtgccgaagccagccaggacatcattgccatcgatgat
tgcgctgtgctggtacagcccttgcagtcgattctgcggcacttgccgacggtgctgcgc
tcgttgaacaaaccgcaggcgctaggccatgtggagctattcagcggcactgccgaggcg
gtgctggtgcgccacgtggcgccgctaccggccgaggacctggccaggctgcaggcgttc
tgcgagcaggccaatgcccagctgtggttgcaaggcgaaggtgagccggcacccgtggac
ccggccgcgcaactgggctttgccctggcgccctggcagctggaactggcctggcgccct
ggcgacttcgtgcaagtgaatgcccaggtcaacacggccatgatcgagcaggccttggcc
tggctcgcaccacaggccgacgagcgcgtgctggacctgttctgtggcctgggcaacttc
gccctgccgctggcccgccaggcgcgcgaggtggtggcagtagaaggtgtgcaggccatg
gtcgatcgggcagcagccaatgcccggaacaacaatgtgcataacgcacggttttttcag
gccgatttatcgcagcctttggcaggcaccggatgggccgccgagggcttttctgcggta
ctcttggatccaccgcgcgacggtgctttcgaggtggtgcaaggcatcgcccgcctcaag
gccagcaggctggtctatgtatcgtgcaacccggccacgctggcgcgagacgcccaggtg
ctggtcggtcaggggtaccggttaaaaagggccgggattctcgacatgtttcctcagacg
gcgcatgtcgaggccatggcgttattcgaagcgggctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (27)   

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