KEGG   Pannonibacter phragmitetus: APZ00_03160
Entry
APZ00_03160       CDS       T04214                                 
Name
(GenBank) succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
pphr  Pannonibacter phragmitetus
Pathway
pphr00300  Lysine biosynthesis
pphr01100  Metabolic pathways
pphr01120  Microbial metabolism in diverse environments
pphr01230  Biosynthesis of amino acids
Module
pphr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pphr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    APZ00_03160
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pphr01002]
    APZ00_03160
Enzymes [BR:pphr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     APZ00_03160
Peptidases and inhibitors [BR:pphr01002]
 Metallo peptidases
  Family M20
   APZ00_03160
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28
Other DBs
NCBI-ProteinID: ALV26195
UniProt: A0A0U3PBD6
Position
complement(660328..661497)
AA seq 389 aa
MTQALSPAVAIARDLIRCPSVTPAEGGALAFLERLLGEAGFTVSRVTFSDTDTPDVENLF
ATIGSGAPHFVFAGHTDVVPAGAESDWQHDPFGGEIRDGVLYGRGAVDMKGGIASFAAAA
LAFIAERGKAFGGTISFLITGDEEGPAVNGTSKLLAWAKEQGYVFDACIVGEPTNPAALG
DAIKIGRRGYLSGIVTVEGTQGHAAYPQLADNPIPGLLALMSALDALVLDTGNERFEPSN
LEIVNLHVGNPAFNVIPARAEGRFNIRFNDEWTLDALKARLHETLATAARPGLRYSLDFR
RDAGESFLTRDDALITALANAVEAVTGRRPDLTTNGGTSDARYIKSYCPVVEFGLVGQTM
HKVDECTPVADLDQLAAVYRRFLDSYFAG
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgacccaagctctgtctcccgccgtcgccatcgcccgcgatctcatccgctgcccctcc
gtcacgcccgccgaaggcggcgcgctggcgtttctggagcgtctgctgggtgaggcaggc
ttcaccgtctcccgcgtcaccttctccgacacggatacgccggacgtggaaaacctcttt
gccacgatcggcagcggcgcgccgcatttcgtctttgccggccacacggatgtggtgcct
gcaggtgcggaaagcgactggcagcatgaccccttcggcggcgaaatccgcgacggcgtg
ctctacgggcgtggcgcggtggacatgaagggcggcatcgcctccttcgcggctgctgcg
ctggccttcatcgcagagcgcggcaaggcattcggcggcaccatttccttcctcatcacc
ggtgacgaggagggcccggcggtgaacggcacgtcgaagcttctcgcctgggcgaaggag
cagggatacgtctttgatgcctgcatcgtcggcgagccgaccaatccggccgccctgggt
gatgccatcaagatcggccgccgtggctatctctccggcatcgtcacggtggaaggcacg
caagggcacgcggcctatccgcagctcgctgacaacccgatccccggcctgctggcgctg
atgagtgcgctggatgcgctggtgctggacacgggcaacgagcggttcgagccgtcgaac
ctcgagatcgtcaacctgcatgtgggcaatccggcgttcaacgtcatcccggcccgcgcc
gaggggcgcttcaacatccgcttcaacgacgaatggacgctggatgcactgaaggccagg
ctgcatgagacgctggctacggctgcccggcccggtctgcgctacagtctcgacttccgc
cgcgatgcgggcgaatccttcctcacccgtgatgatgcgctgatcacggcgctggccaat
gccgtggaagcggtgacaggccgccgcccggatctgaccaccaacggcggcacgtcggat
gcccgctacatcaagagctactgcccggtggtggaattcggccttgtcggccagaccatg
cacaaggtggatgaatgcacgccggtcgccgatctcgaccagctcgctgccgtctaccgc
cgcttcctcgacagctatttcgcgggttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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