KEGG   Pseudomonas putida ND6: YSA_02244
Entry
YSA_02244         CDS       T02170                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
ppi  Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppi03032]
    YSA_02244
   03400 DNA repair and recombination proteins [BR:ppi03400]
    YSA_02244
Enzymes [BR:ppi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     YSA_02244
DNA replication proteins [BR:ppi03032]
 Prokaryotic type
  DNA Topoisomerases
   YSA_02244
DNA repair and recombination proteins [BR:ppi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      YSA_02244
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C AAA_27
Other DBs
NCBI-ProteinID: AFK67980
UniProt: I3UR59
Position
complement(1202793..1205552)
AA seq 919 aa
MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPEVTIDELMQFIPGPDFPTAGIINGRQGIIEAYRTGRGRI
YMRARSEIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD
GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALVDGRPRLLNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA
VQVMVERAGADACRPEDLPEQYGLHDGKYFLSPEQAQAILDLRLHRLTGLEHEKLLAEYQ
EILEQIGELIRILSSAERLMEVIREELEAIRAEYGDVRRTEILNASHDLNYGDMIPEEER
VVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFSSKGKV
YWKKTYEIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADLDEELDEADDTV
LEGELVEAEEVDEEDGDTPEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGLIALKL
KEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGVRGMKLGKGQRIISML
IPESGSQILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQEGEEIM
LISDQGTLVRTRVGEVSSLSRNTQGVTLIKLAADETLVGLERIQEPSEDELDEVIEADEE
GVEAEAPDESAGAEEAPQE
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgaactgagacagtct
tacctcgactacgcgatgagcgtgattgtcgggcgagcgctgcccgatgcgcgtgacggc
ttgaagcccgtgcatcgccgcgttctctatgcgatgagcgaactgggcaacgactggaac
aagccgtacaagaaatccgcccgtgtggtcggtgacgtgatcggtaagtaccacccgcac
ggcgacactgcggtctacgacaccatcgtgcgtatggcccagccgttctcgttgcgctac
ctgctggtcgacggccagggcaacttcggttcggtggacggcgacaacgctgccgccatg
cgatacaccgaagtgcgcatgaccaagctggcccacgagctgctggccgacctgcacaag
gaaaccgtcgactgggtgcccaactacgacggcaccgagcagatcccggcggtcatgccg
acgcgtattcccaacctgctggtcaacggctccagcggtattgccgtgggcatggcgacc
aatattccgccgcacaacctcggtgaggtcatcgatggctgcctggcgctcatcgacaac
ccggaagtcaccatcgatgaactgatgcagttcatccctggcccggacttcccgactgcc
ggcatcatcaacggtcgccagggcatcatcgaggcctatcgcaccggccgtggccgcatc
tacatgcgcgcccgctccgagatcgaagacatcgacaaggttggcggccgccagcagatc
gtgatcaccgagctgccgtaccagctgaacaaggcgcgcctgatcgagaagatcgccgag
ctggtcaaagagaagaagatcgaaggcatcaccgagctgcgcgacgagtccgacaaggac
ggcatgcgcatcgtcatcgagctgcgtcgcggcgaggtgccggaggtggtgctcaacaac
ctctaccagcaaacccagctgcagagcgtattcggcatcaacgtggtggccctggtcgac
ggccgtccgcggctgctcaacctcaaggacctgctcgaagcgttcgtccgccaccgccgt
gaagtggtgacccgccgtaccgtatttgagctgcgcaaggcccgtgaacgcggtcatatc
cttgaaggccaggcggtcgcgctgtccaacatcgacccggtcattgccctgatcaaggcc
tcgccgacgccgtccgaagccaaggaagccctggtttccacgccgtgggaatccagtgcc
gtgcaggtcatggtcgagcgcgccggcgccgacgcctgccgccctgaggacctgccggag
cagtacggcctgcatgacggcaagtacttcctgtcgccggaacaggcccaggccattctc
gacctgcgcctgcaccgcctgaccggcctggagcacgagaagctgctggccgagtaccag
gaaatcctcgagcagatcggcgagttgatccgcatcctcagcagcgccgagcgcctgatg
gaagtgattcgcgaggagctggaggccatccgtgccgagtacggcgatgtgcgccgcacc
gaaatcctcaatgccagccacgacctcaactacggcgacatgatcccggaagaagagcgc
gtggtcaccatctcccatggtggttatgccaagacccagccattgtccgcctaccaggcc
cagcgccgcggcggcaaaggcaagtcggcgaccggcgtgaaggacgaggactacatcgag
cacctgctggtcgccaacagccatgccaccctgttgctgttctccagcaagggcaaggtg
tactggaagaagacctacgaaatccccgaagcgtcccgcgctgcccgcggtcgtccgctg
gtcaacctgctgccgctggaggagggtgagcgcatcaccgccatgctgcagatcgacctc
gaagcgctgcagcagaacgccgacctcgacgaagagctggacgaggctgatgacaccgtg
ctcgagggtgagctggtggaggccgaggaagtcgacgaagaagacggcgacaccccggag
tgggttgcagagccgaccggcgcgtacatcttcatggcgaccgcttccggtaccgtcaag
aagaccccgctggtgcagttcgcccgtccgcgctccaacggcctgatcgccctgaagctg
aaggaaggcgacaccctgattgccgcggccatcaccgatggcgccaaggaagtcatgatg
ttctccgacgctggcaaggtcattcgctttgccgagagcgtcgtgcgtgaaatgggccgc
aacgcccgtggtgtacgcggcatgaagctgggcaaaggccagcggatcatctcgatgctg
atcccggagtccggctcgcagatcctcaccgcctccgagcgtggctttggcaagcgcacc
ccgctgtccaagttcccgcgtcgcggccgtggtggccagggtgtgatcgccatgggtacc
aaagggcgcaacggcctgctgatcggggctatccaggtgcaggaaggcgaggagatcatg
ctgatttccgaccagggcacgctggttcgcacccgggttggcgaggtgtccagcctgagc
cgcaacacccagggtgttacgctgatcaagctggcggccgatgagacactggtgggcctg
gagcgtatccaggagccgtccgaggacgagctcgatgaagtgatcgaggcggacgaggag
ggtgtcgaagccgaagcgccagacgaatctgcaggcgccgaagaggccccgcaagagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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