KEGG   Pseudomonas putida ND6: YSA_06293
Entry
YSA_06293         CDS       T02170                                 
Name
(GenBank) RluA family pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
ppi  Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppi03009]
    YSA_06293
Enzymes [BR:ppi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     YSA_06293
Ribosome biogenesis [BR:ppi03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    YSA_06293
SSDB
Motif
Pfam: PseudoU_synth_2 S4 TruB_N
Other DBs
NCBI-ProteinID: AFK70162
UniProt: I3UXE1
Position
3400537..3401595
AA seq 352 aa
MMSAPANPGTKEAVFNHKLAAETKGCAPAESSMSEIIQLSAEVPSELGGQRLDQVAAQLF
AEYSRSRLTSWIKEGRLTVDGAVVRPRDLVHGGSLLALEAEQEAQGEWIAEDIELDIVYE
DDHILVINKPAGLVVHPAAGHASGTLLNALLHHVPDIVNVPRAGIVHRLDKDTTGLMVVA
KTLQAQTKLVEQMQARKVSRIYECIVIGVVTAGGKIDAPIGRHGGMRQRMAVTDGGKPAV
SHYRVLKRFRSHTHVRVKLETGRTHQIRVHMAHVGFPLVGDQTYGGRFRIPPAASPTMVE
AVKTFPRQALHARFLALAHPITGEVMKWESPLPDDFVWLLSLLNQDRESFIG
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgatgagcgccccggccaaccccgggacaaaagaagccgtatttaaccacaagctcgca
gccgaaaccaaaggctgtgcgcccgccgaatcgagcatgtccgagatcattcaacttagc
gcagaggtaccgtccgaactgggcggccaacgcctcgaccaggtcgccgcccaattgttc
gccgagtactcgcgttcgcggctaacttcgtggatcaaagagggccgcctgacggtcgat
ggtgcagtcgtgcgccctcgagaccttgttcatggtggctctctgcttgccctggaggct
gaacaagaggcccagggcgagtggatcgcagaagatatcgaattggatatcgtctacgaa
gacgaccacatcctggtgatcaacaagcctgccgggctggttgtgcacccggcggccggg
catgccagcggcaccctgctcaacgcgctgctgcaccatgtgccagacatcgtcaacgtg
ccgcgcgccggtatcgtgcaccgcctggacaaggacaccaccggcctgatggtggtggcc
aagaccttgcaggcgcagaccaagctggtcgagcagatgcaggcccgcaaggtcagccgc
atctacgagtgcatcgtgattggcgtggtgaccgccggtggcaagatcgacgcgcccatc
ggtcgtcacggcggcatgcgccagcgcatggctgtaaccgacggcggcaagccggcggtc
agccactaccgcgtactcaagcgcttccgctcgcacacccatgtgcgggtcaagctggaa
accggccgtacccaccagattcgcgtgcacatggcccacgtgggtttcccgctggttggc
gaccagacgtacggcgggcgcttccgtattccgcccgctgccagcccgaccatggtcgag
gcggtcaagaccttcccgcgccaggcgctgcatgcgcgtttccttgccttggcccacccg
attaccggtgaagtcatgaagtgggaatcgccactgccggatgacttcgtctggttgctg
tcgctgctgaaccaggaccgcgagagcttcatcggatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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