KEGG   Pseudomonas putida ND6: YSA_10000
Entry
YSA_10000         CDS       T02170                                 
Name
(GenBank) exonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    YSA_10000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppi03400]
    YSA_10000
Enzymes [BR:ppi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     YSA_10000
DNA repair and recombination proteins [BR:ppi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     YSA_10000
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: AFK72202
UniProt: I3V381
Position
complement(5369454..5370266)
AA seq 270 aa
MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK
GHYGVALLSRQAPLSLHKGFATDEEDAQRRFIWGTFADANGSPITIMNGYFPQGESRDHP
TKFPAKQRFYSDLQALLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF
LPEEREWMERLKGWGLVDSFRHLYPEVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQPL
VPRIKAAGVDYELRGMEKPSDHAPIWLELS
NT seq 813 nt   +upstreamnt  +downstreamnt
atgaagatcgtctgtttcaacatcaacggcctgcgggcccgcccgcatcagctggcggcg
ctgatcgaaaagcaccagccggacgtgatcggcctgcaggaaaccaaggtcagcgacgat
cagttcccgctggccgacgtgcaggcactgggttaccacgtgcactaccatggccagaaa
ggccactacggcgtggccctgctgtcgcgccaggcgccgctgagcctgcacaagggcttt
gccaccgacgaagaagatgcccagcgccgcttcatctggggtacctttgccgatgccaac
ggcagcccgatcaccatcatgaacggctatttcccccaaggcgaaagccgcgaccacccc
accaagttcccggccaagcagcgcttctacagcgacctgcaggcactgctggaaagccag
ttccgcaacgaccagccagtgctggtgatgggcgacatgaacatttcgccgcaagactgt
gatatcggcattggcccggacaacgccaaacgctggctgaagaccggcaagtgcagcttc
ctgccggaggagcgtgagtggatggaacgtttgaaaggctgggggttggtagacagcttc
cgccacctgtacccggaggtgaccgaccgtttcagctggttcgactaccgaagccgcggc
tttgaggacgagcccaagcgcggcctgcgcatcgacctgatcatggcctcgcagccactg
gtgccgcgcatcaaggcagcgggcgtcgactatgagctgcgcgggatggaaaagccgtcg
gaccatgcgccgatctggctggagttgagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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