KEGG   Phaeobacter piscinae: PhaeoP14_02193
Entry
PhaeoP14_02193    CDS       T05105                                 
Name
(GenBank) transcriptional regulator, TraR/DksA family
  KO
K06204  RNA polymerase-binding transcription factor
Organism
ppic  Phaeobacter piscinae
Brite
KEGG Orthology (KO) [BR:ppic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppic03000]
    PhaeoP14_02193
   03021 Transcription machinery [BR:ppic03021]
    PhaeoP14_02193
   03009 Ribosome biogenesis [BR:ppic03009]
    PhaeoP14_02193
Transcription factors [BR:ppic03000]
 Prokaryotic type
  Other transcription factors
   Others
    PhaeoP14_02193
Transcription machinery [BR:ppic03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     PhaeoP14_02193
Ribosome biogenesis [BR:ppic03009]
 Prokaryotic type
  rRNA transcription factors
   PhaeoP14_02193
SSDB
Motif
Pfam: zf-dskA_traR zf-C3HC4_2
Other DBs
NCBI-ProteinID: ATG40272
Position
complement(2318170..2318487)
AA seq 105 aa
MNHAAQKDILTHLRKGLPAVGAPITAEASVVPLAPRRTSPAMAQPSEAVLSRKWLELRRD
IDCALARLDEGSYGYCQICGDRISDSHLSEHPATPFCASCAGETR
NT seq 318 nt   +upstreamnt  +downstreamnt
atgaaccacgccgctcaaaaggacatactgacacatttgcgcaagggcctgccagccgtt
ggcgcgccgatcactgctgaggcctctgtggtgccgctggcgccccgtcgcacaagcccg
gccatggcgcagccgtccgaggccgtgcttagccgcaagtggctggagctgcgccgcgat
atcgactgcgcactggcccgtctcgatgaggggtcctatggctattgccagatctgcggc
gatcgcatcagcgacagccatctgagtgagcatcccgccacccccttctgcgcttcctgt
gccggggagacacgctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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