KEGG   Pseudoalteromonas piscicida: B1L02_09900
Entry
B1L02_09900       CDS       T04942                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
ppis  Pseudoalteromonas piscicida
Pathway
ppis03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B1L02_09900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppis03400]
    B1L02_09900
DNA repair and recombination proteins [BR:ppis03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B1L02_09900
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH HHH_5 HHH_3 HHH_2 DUF4602
Other DBs
NCBI-ProteinID: ASD67298
UniProt: A0A3B6Y380
Position
1:complement(2111263..2113086)
AA seq 607 aa
MTEFDYKPFLKTLTTEPGVYRMYDVDDQVIYVGKAKNLKKRVSSYFRSTITDSKTRVLVS
NIDHIEVTLTNTETEALLLENNLIKKYQPRYNILLRDDKSYPYIFLSAHQHPRLAFHRGS
RKQKGEYFGPFPSSAAVSESLRLMQKIFPVRQCEDAYYRARSRPCLQYQLKRCSGPCVGK
VSDEEYQEQVAMVRQFLTGRSQDVISALVERMESASMSLDFEKAAKHRDQIALLRQMQEQ
QSIAGNFAELDVIGYEQKNGLVAIHVLMIREHKVLGTKTHFPKVPKDSGADEVLTSFLGQ
YYISTGNHSRIAKEIVLPFEIEEGSALEAALSQVSKRKVNFKCNVRGERAQYLALANKNA
QNSIEVKQSAQDSITKRYAKLKAVLGLSDIQRMECFDISHTMGENTVASCVVFDGQGPNN
REYRRYNVTGITPGDDYAAMDFALNKRYGKMSDEAKVPDIIFIDGGKGQLGRAESFFADW
QLNKMPILIGVAKGTSRKPGLETLLIDGGRKTVNVESDSPALHLIQHIRDESHRFAIAGH
RNKRQKQRTQSVLEEIEGIGQKRRQALLKFLGGMQGVKSANIHQLKQVPGISPEMAEKIF
NHLHDKA
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgactgaatttgactacaaaccttttctcaagacattaacaacagaacctggtgtgtac
cgcatgtacgatgtggatgaccaggtaatctatgttggtaaagcaaaaaacctcaaaaaa
cgagtttctagctacttccgctcgactatcactgatagtaaaacgcgggtattggtcagt
aatattgatcatattgaagtaacgttaacgaataccgaaaccgaagcgctgcttttagaa
aataacttaattaagaaatatcagccgcgttacaacatcctcttaagagatgataaaagt
tatccgtatattttcctgagcgcccatcagcatccaagacttgcatttcatcgtggtagt
aggaagcaaaaaggcgaatattttggtccttttcctagtagtgcggcggtatcagaaagt
ctgaggttaatgcagaagattttccctgttaggcaatgcgaagatgcgtattaccgcgca
cgcagccgaccttgtttgcagtatcagctaaaaaggtgttcaggaccatgcgttggcaag
gtaagtgacgaagaataccaagaacaagttgccatggttcgacagtttttgacgggacgt
tcacaggacgttatctctgcgctggtggagcgaatggaatccgccagtatgtctttggat
tttgagaaagcggcaaaacacagagaccaaattgctttattaaggcagatgcaagaacag
cagtccattgctgggaactttgcagaacttgatgtcatcggttatgagcagaagaacggc
ttagtagccattcatgtactgatgataagggaacataaagtacttgggacaaaaactcat
tttccaaaagtgccaaaagattctggtgctgatgaagtgctaacctctttcctcgggcag
tattatatttcaacgggtaaccactctagaattgccaaagaaattgtattgccatttgaa
atagaagagggaagtgcgttagaagccgcactgagccaagtttcgaagcgcaaagttaac
ttcaaatgcaatgttcgtggagaacgggctcaatatcttgcattggcaaataaaaatgcg
caaaacagtattgaagttaaacaaagtgcacaagactcaatcaccaaacgatatgccaaa
ctaaaagcggtgctaggactgtcagacattcaaagaatggagtgttttgatatcagccat
accatgggagaaaacacggtcgcatcgtgcgttgtattcgatggtcaagggccaaacaat
agagagtatcgcagatataatgtgacagggatcacccctggggatgattacgcagcgatg
gattttgcattaaataagcgttacggcaaaatgtcggatgaagcgaaagtacccgatatt
atttttattgatggtggtaaggggcagttaggtagggcggaatctttcttcgctgattgg
caactcaataaaatgccgatactgataggggttgcaaaaggcacaagccgaaagccagga
ttagaaacattgctaatagatggcggtcgtaaaacggtgaatgttgaaagtgattcacct
gcattacaccttattcagcatattcgcgacgaatcacatcgctttgcaattgcagggcat
cgtaataaaagacaaaaacaaagaacacaatctgtgcttgaagagattgaaggcataggt
cagaaaagacgtcaggcattacttaaatttttgggaggcatgcagggagttaaatctgca
aatatacatcaattaaagcaagttcctgggatcagccctgaaatggctgaaaagatattt
aatcatttgcatgacaaagcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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