KEGG T04942: B1L02

Pseudoalteromonas piscicida: B1L02_12405

Entry

B1L02_12405       CDS       T04942

Name

(GenBank) tRNA pseudouridine(55) synthase TruB

K03177

tRNA pseudouridine55 synthase [EC:5.4.99.25]

Organism

ppis Pseudoalteromonas piscicida

Brite

KEGG Orthology (KO) [BR:ppis00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppis03016]
    B1L02_12405
Enzymes [BR:ppis01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     B1L02_12405
Transfer RNA biogenesis [BR:ppis03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    B1L02_12405
Prokaryotic type
    B1L02_12405

SSDB

Motif

Pfam:

TruB_N TruB_C_2 TruB-C_2 TruB_C

Other DBs

NCBI-ProteinID:

ASD67741

UniProt:

A0A3B6Y4S7

Position

1:complement(2659382..2660329)

AA seq 315 aa
MARRTKGRAIDGILLLNKPQGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAQLGERTTTSDSDGEIVETRPVDITLEQLEREIASFLGESDQ
YPSMYSALKYQGQPLYKYAREGIEVPRKCRKINVYRITLDEYDEQTQQIQMTVHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRSEVGHYPSDKMITLVELEALLEKAKAEEVAPSTYLDE
LLLPMDTALVDLTVVDITTEQGIAFGHGQTVAVANLPDGIVKVVADGKFVGIGERNPQGL
LKAKRALSSAPPESQ

NT seq 948 nt +upstreamnt +downstreamnt
atggcgcgtcgcaccaaaggccgtgcgattgacggcattctgttattaaataagccgcaa
ggtatttcttctaacaaagcactgcagcaagcgaaaggcatctatttcgctcagaaagcg
ggccacactggtgctttggatccgttggcaacaggtatgttgccaatttgctttggtgaa
gcaactaagtttacccaatttttgcttgatactgataaaacctacgtggtgagagcacag
ctgggtgagcgtacaacgacatctgattctgatggtgaaattgttgaaacgaggccagtg
gatattacgcttgagcagctagagcgagaaattgccagcttcttgggtgaatctgatcaa
tacccttcgatgtattcggcgctcaaatatcagggccaaccgttatacaaatatgctcga
gaaggcatcgaagtaccgcgtaaatgccgtaagatcaatgtttaccggattacgttagac
gaatatgacgagcaaactcaacaaattcaaatgacggtacatgtgtctaaaggcacctat
attcgtacgatagtcgatgatttaggtgaaaaacttggctgtggtgcgcatgttattatg
ttacaccgtagtgaagttggtcattatcctagcgataaaatgattaccttagtcgagctg
gaagctttacttgaaaaagcaaaagcggaagaagtcgcaccttccacttatttagatgaa
ttattgttgccgatggataccgctctggttgacctgactgttgtcgatattactactgaa
caaggtatcgcgtttggtcatggtcaaaccgttgcagtggccaacttacctgacggtatt
gttaaagtcgttgcagacggtaagtttgttgggattggcgagcgtaatccgcaagggtta
ttgaaagcaaaacgggcgctctcttccgctccaccagaatcgcaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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