KEGG   Pseudomonas plecoglossicida: RK21_04344
Entry
RK21_04344        CDS       T03646                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
ppj  Pseudomonas plecoglossicida
Pathway
ppj00260  Glycine, serine and threonine metabolism
ppj00460  Cyanoamino acid metabolism
ppj00630  Glyoxylate and dicarboxylate metabolism
ppj00670  One carbon pool by folate
ppj00680  Methane metabolism
ppj01100  Metabolic pathways
ppj01110  Biosynthesis of secondary metabolites
ppj01120  Microbial metabolism in diverse environments
ppj01200  Carbon metabolism
ppj01230  Biosynthesis of amino acids
ppj01240  Biosynthesis of cofactors
Module
ppj_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:ppj00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    RK21_04344
  09102 Energy metabolism
   00680 Methane metabolism
    RK21_04344
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RK21_04344
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    RK21_04344
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    RK21_04344
Enzymes [BR:ppj01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     RK21_04344
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Cys_Met_Meta_PP Aminotran_5 DegT_DnrJ_EryC1 OKR_DC_1
Other DBs
NCBI-ProteinID: AJG15852
UniProt: A0A099MV25
Position
4546642..4547895
AA seq 417 aa
MFSRDLTIAKYDAELFEAMQQEALRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDSNGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMASV
FIERGFDVVSGGTQNHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECRELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGN
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttcagccgtgatttgaccattgccaagtacgacgccgagctcttcgaagccatgcag
caagaagctctgcgccaggaagagcatatcgagctgatcgcttcggaaaactacaccagc
ccggcagtcatggaggcccagggctcggtcctgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggtggttgcgagtacgtcgacgtcgtcgagcagctggccatcgac
cgtgccaaggaactgttcggcgccgactacgccaacgtccagccgcacgccggctcccag
gccaacgccgccgtctacctggccctgctgtcggccggtgacaccatcctgggcatgagc
ctggcccacggtggccacctgacccacggtgcttcggtaagctcctcgggcaagctgtac
aacgccatccagtacggcatcgacagcaacggcctgatcgactatgacgaagtcgagcgc
ctggctgtcgagcacaagccgaagatgatcgttgccggcttctcggcctactcgcaggtg
ctggacttcgcccgcttccgcgccatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgttgccggcctggttgccgctggcgtgtacccgaaccctgttccgttcgcc
gacgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatcctc
gctcgcaagaacgaagagatcgagaagaagctgaactccgccgtcttccctggcgcccag
ggtggcccgctggagcacgtcatcgctgccaaggccatctgcttcaaggaagccctgcag
cctgagttcaaggcttaccagcagcaggtcgtgaagaacgcccaggccatggccagcgtg
ttcatcgagcgtggtttcgacgtggtttccggtggcacccagaaccacctgttcctgctg
tcgctgatcaagcaggaaatctccggcaaggacgctgacgccgccctgggcaaagccttc
attaccgtcaacaagaactcggtaccgaacgacccacgttccccgttcgtcacctcgggc
ctgcgtttcggcaccccagccgttaccacccgtggtttcaaggaagccgagtgccgcgag
ctggctggctggatctgcgacatcctggctgacctgaacaacgaagcggtgatcgacgcc
gtgcgtgagaaggtcaaggccatctgcaagaagctgccggtttacggcaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (39)   

Download RDF
DBGET integrated database retrieval system