KEGG   Pseudomonas plecoglossicida: RK21_05866
Entry
RK21_05866        CDS       T03646                                 
Name
(GenBank) transcription elongation factor NusA
  KO
K02600  transcription termination/antitermination protein NusA
Organism
ppj  Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:ppj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppj03021]
    RK21_05866
   03009 Ribosome biogenesis [BR:ppj03009]
    RK21_05866
Transcription machinery [BR:ppj03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     RK21_05866
Ribosome biogenesis [BR:ppj03009]
 Prokaryotic type
  rRNA transcription factors
   RK21_05866
SSDB
Motif
Pfam: NusA_N KH_5 HHH_5 S1 KH_2 KhpA-B_KH RNA_pol_A_CTD
Other DBs
NCBI-ProteinID: AJG17374
UniProt: A0A099N6M3
Position
6180913..6182394
AA seq 493 aa
MSKEVLLVVESVSNEKGVPPGVIFEALEVALATATKKRFEDEVDLRVEINRHTGSYETFR
RWTVVDEADLDDPAIETWLSKIHETHPEAKVGDVIEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERVGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIIPRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPQMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVAEDNLAQAIGRGGQNVRLASQLTGWTLNVMTEKDIQAKQQAETGDILRN
FIDELEVDEELAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDIVNELRARAKDRLLTKA
IATEEKLADAHPADDLLSLEGMDKDLAAELAVRGVVNREDLAEQSIDDLLDIDGIDEERA
GKLIMAARAHWFE
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgagcaaagaagtactgctggttgttgaatcggtatccaacgaaaaaggtgtaccgccc
ggcgtcattttcgaagcgctggaagtggcactggccactgcaaccaaaaaacgttttgaa
gacgaagtcgacctgcgtgtggaaatcaaccgccacaccggtagctacgagaccttccgt
cgctggaccgtggtcgacgaagccgatcttgatgatccggcgatcgagacctggttgagc
aagattcacgaaacccaccctgaagccaaggttggtgacgtgatcgaagagaagatcgag
tccatcgaattcggtcgtattgccgcccagaccgccaagcaggtcatcgtgcagaaggtc
cgtgaggccgagcgtgcccaggtggtcgatgcctaccgcgagcgcgttggcgagatcatc
tccggtaccgtcaaaaaggttacccgcgacaacgtcatcgttgacctgggcaacaacgcc
gaggccctgctggcccgcgaagacatcattccgcgcgagaccttccgtgttggcgtgcgc
ctgcgtgcgctgctcaaggaaattcgcaccgagaaccgtggcccacagctgatcctgtcg
cgcaccgcgccacagatgctgatcgagcttttccgcatcgaagtgccggaaattgccgag
ggcctcatcgaagtcatggctgcatcccgtgatccgggttcgcgagccaagatcgccgtc
cgctccaaggacaagcgcatcgacccgcaaggcgcctgtatcggcatgcgtggttcgcgc
gtccaggccgtatccggggagttgggtggtgagcgtgtggatatcgtcctgtgggacgat
aacccggcgcagttcgtcatcaacgccatgtcgccggctgaagtcgcggcgatcatcgtt
gatgaagatgcccatgccatggacatcgccgttgccgaggacaacctggcccaggccatt
ggtcgtggcggtcagaacgttcgcctggccagtcagctgaccggctggaccctgaacgtg
atgaccgagaaggacatccaggccaagcagcaggccgaaaccggtgacatcctgcgcaat
ttcatcgatgaactggaagtcgacgaggagctggcccaagtgctggtcgacgaaggcttc
accagcctcgaagaaattgcctacgtaccgttggaagaaatgctcaacatcgatggcttt
gacgaagatatcgtcaacgagctccgcgctcgagccaaggaccgtttgttgaccaaggcc
atcgctaccgaagaaaaactggcagacgcccatccggctgacgacctgctctccctcgag
ggtatggacaaggacctggcggcggaactggcggtgcgcggcgtggttaaccgcgaagac
ctggccgagcagtcgatcgacgatctgctcgacatcgacggcatcgacgaagagcgtgcc
ggcaagttgatcatggccgcccgagcccactggttcgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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