KEGG   Pandoraea pnomenusa 3kgm: U875_02135
Entry
U875_02135        CDS       T02936                                 
Name
(GenBank) ribonucleotide-diphosphate reductase subunit beta
  KO
K00526  ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Organism
ppk  Pandoraea pnomenusa 3kgm
Pathway
ppk00230  Purine metabolism
ppk00240  Pyrimidine metabolism
ppk01100  Metabolic pathways
ppk01232  Nucleotide metabolism
Module
ppk_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
ppk_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:ppk00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    U875_02135
   00240 Pyrimidine metabolism
    U875_02135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppk03400]
    U875_02135
Enzymes [BR:ppk01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     U875_02135
DNA repair and recombination proteins [BR:ppk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    U875_02135
SSDB
Motif
Pfam: Ribonuc_red_sm PPP5 DUF455 Oxygenase-NA
Other DBs
NCBI-ProteinID: AHB04328
Position
454776..455927
AA seq 383 aa
MLNWEEDTTAKSPAPAAAPSPAAAPASNILGTQGDTPSVIASQSTRRVSASDKRVINGTT
DVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLTEDERRIIKRNLGFF
VTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAY
HEVPSIRDKDEFLLPFIEVVADPSFQTGTQEADQKLLRSLIVFACIMEGLFFYVGFTQIL
ALGRQNKMTGAAEQYQYILRDESMHCNFGIDLINQVKLENPNLWTPEFREEIRELFKKAV
ELEYRYAEDTMPRGVLGLNAGMFKSYLRFIANRRCAQIGLEALFPNEENPFPWMSEMIDL
KKERNFFETRVIEYQTGGALSWD
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgctgaactgggaagaagacaccactgccaaatcgccggctccggccgccgctccgagt
ccggccgctgcgcctgcgtcgaacatcctcggcacccagggggataccccgagtgtgatc
gcctcgcagtcgacgcgtcgcgtgagcgcctcggacaagcgcgtgatcaacggcacgacg
gacgtgaaccagctggtgccgttcaagtacaagtgggcttgggagaagtatctcgccggc
tgcgcgaaccactggatgccgcaggaaatcaacatgtcgcgcgacatcgccctgtggaag
gacccgaacggtctgaccgaggacgagcgccgcatcatcaagcgcaacctcggcttcttc
gtgacggccgactcgctcgccgcgaacaacatcgtgctgggcacctatcgccacatcacc
gcgccggagtgccgccagttcctgctgcgccaggcgttcgaagaggccatccacacgcac
gcgtatcagtacatcgtcgagagcctgggcctggacgaaggcgagatcttcaacgcctat
catgaagtgccgtcgattcgcgacaaggacgagttcctgctgccgttcatcgaggtggtc
gccgatccgtcgttccagacgggcacgcaggaagccgaccagaagctgctgcgctcgctg
atcgtcttcgcctgcatcatggaaggcctgttcttctacgtcggcttcacgcagatcctc
gcactgggtcgccagaacaagatgaccggcgccgcggagcagtatcagtacatcctgcgc
gacgagtcgatgcactgcaacttcggcatcgacctgatcaaccaggtgaagctggaaaac
ccgaacctgtggacgccggagttccgcgaggagatccgcgagctgttcaagaaggccgtc
gagctcgagtatcgctatgccgaagacacgatgccgcgcggcgtgcttggtctgaatgcg
ggcatgttcaagagctatctgcgcttcatcgcgaaccgtcgctgcgcacaaatcggtctc
gaggcactcttcccgaacgaagaaaatccgttcccgtggatgagtgagatgatcgatctg
aagaaggagcgcaacttcttcgagacgcgagtgatcgagtaccagaccggtggcgcgctg
agctgggactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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