KEGG   Pandoraea pnomenusa RB38: DA70_16995
Entry
DA70_16995        CDS       T03067                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
ppno  Pandoraea pnomenusa RB38
Brite
KEGG Orthology (KO) [BR:ppno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppno03400]
    DA70_16995
Enzymes [BR:ppno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DA70_16995
DNA repair and recombination proteins [BR:ppno03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    DA70_16995
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_22 ResIII
Other DBs
NCBI-ProteinID: AHN75962
UniProt: A0A856LQV1
Position
5216535..5218640
AA seq 701 aa
MSSFPLNPAQNEATHYFDGPCLVLAGAGSGKTRVITQKIAWLIEAKGFEPKHIAAVTFTN
KAAAEMRERVAKQLEGKTLTTPGKEGRKVPVNQLTICTFHSLGVQILRREAEHVGLKPQF
SILDADDCFGLIQEQLGTTDKAMIRGVQTAISLWKNGMVTPDVALAAAETADEHQAALVY
RNYMATLQAYQAVDFDDLIRLPAQLFERDEEVRDRWQNKLRYLLIDEYQDTNTCQYLLLK
LLAGKRAAFTAVGDDDQAIYGWRGATLENLKQLQVDFPTLKVIKLEQNYRSTSRILTAAN
NVIAKNPKIFEKKLWSEHGLGDPITVTAMNDEEHEAESVVFRLSAHKFERRAEFRDYAIL
YRGNHQARIFEQVLRRERIPYVLSGGQSFFDKAEIKDLCAYLRLLANPDDDPAFIRAVTT
PRRGVGSTTLEVLGGFAGQAKVSLFEAVYMGAVEARLQPRQLEPLRAFCDFIQRIAARAA
RDPANEVIDDLMEGVHYEAYLYDTFDERQAQSRWTTVLEFLEWMKRKGTRGDEAQTTGFD
TADGLDDDGKSLMELTQTIALMSMLEGRDGDDPDAVRLSTLHASKGLEYPHVFLVGVEEG
ILPHIREDEEVTAEKIEEERRLMYVGITRAQRSLQLSWCKKRKRARETYSCEISRFVPEM
QLDEAPPPPPEDAPMSPKDRLASLKAMLAGGANKTPSSTGA
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgtcgtcctttccgctcaatcccgcccagaacgaagccacgcactacttcgacggcccg
tgcctcgtgctggccggggcgggcagcggcaagacccgcgtcatcacgcaaaagatcgcg
tggctcatcgaagcgaagggatttgagccgaagcacatcgccgccgtcacgttcacgaac
aaggccgccgccgaaatgcgcgaacgcgtggccaagcagctcgaaggcaagacactcacc
acgcccggcaaggaggggcgcaaggtgcccgtcaatcagctcacgatctgcacgttccac
tcgctgggcgtgcagattttgcgccgcgaggcggaacacgtcggtctgaagccgcagttc
tcgattctcgatgccgacgactgcttcggcctgatccaggagcaattgggcacgaccgac
aaggcgatgatccgcggcgtgcagaccgccatctccctgtggaaaaacggcatggtcacg
cccgacgtggcgctggccgcggccgagaccgccgacgagcatcaggcagccctggtctat
cgcaattacatggcgacgttgcaggcctaccaggccgtcgatttcgacgatctgatccgg
ctgcccgcgcagctcttcgagcgcgacgaggaagtgcgtgatcgctggcagaacaagctg
cgctatctgctcatcgacgaataccaggacaccaacacctgccagtatctgctgctcaag
ctgctcgcgggcaagcgcgcggcattcaccgccgtgggcgacgacgaccaggcaatctac
ggctggcgcggcgccacgctcgagaacctcaagcagttgcaggtcgacttccccacgctc
aaggtcatcaagctcgagcagaactatcgctcgacgtcgcgcattctcacggcggcgaac
aacgtcattgcgaagaatccgaaaatcttcgagaagaagttgtggagcgagcacggcctg
ggcgatccgatcaccgtgaccgcgatgaacgacgaagaacacgaagccgagtcggtcgtg
ttccggctctcggcgcacaagttcgagcggcgcgcggagtttcgcgattacgcgatcctg
taccgcggcaaccaccaggcgcgcatcttcgaacaggtgctgcggcgcgaacgcattccg
tacgttctctcgggcggacagtcgttcttcgacaaggccgaaatcaaggatctgtgcgcg
tacctgcgcctgctcgccaatcccgacgacgaccccgcattcattcgcgccgtcaccacc
ccgcgtcgcggcgtgggcagcaccacgctggaagtgctgggcggcttcgcggggcaggcc
aaggtctcgctgttcgaggcggtctacatgggtgccgtggaagcgcggctgcaaccgcgt
cagctcgaaccgctgcgcgcgttctgcgacttcattcagcgcattgcggcgcgcgcggcg
cgcgatccggccaacgaggtcatcgacgatctcatggaaggcgttcactacgaggcctac
ctctacgatacgttcgacgaacgccaggcccagtcgcgctggacgaccgtgctcgaattc
cttgaatggatgaagcgcaagggcacgcgcggcgacgaagcgcagacgaccggcttcgac
accgccgacgggctcgacgacgacggcaagagcctgatggaactcacgcagaccatcgcg
ctgatgtcgatgctcgaagggcgcgacggcgacgacccggacgccgtgcgcctgtcgacg
ctgcacgcctccaagggcctcgagtatccgcatgtcttcctcgtgggcgtggaggaaggc
atcctgccgcacattcgcgaagacgaagaggtcaccgccgagaagatcgaggaagagcgc
cgcctgatgtacgttggcatcacccgcgcgcaacgctcgcttcagttgtcgtggtgcaag
aagcgcaagcgggcgcgcgagacctattcgtgcgaaatctcgcgcttcgtgcccgagatg
caactcgacgaagcgccgcctccgccgcccgaagacgccccgatgtcgcccaaggaccgg
ctcgccagcctgaaggcgatgctcgccggtggcgccaacaaaacgccgtcgtcgaccggt
gcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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