KEGG T02956: X809

Paenibacillus polymyxa CR1: X809_10035

Entry

X809_10035        CDS       T02956

Name

(GenBank) ribonuclease III

K03685

ribonuclease III [EC:3.1.26.3]

Organism

ppol Paenibacillus polymyxa CR1

Brite

KEGG Orthology (KO) [BR:ppol00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppol03019]
    X809_10035
   03009 Ribosome biogenesis [BR:ppol03009]
    X809_10035
   03036 Chromosome and associated proteins [BR:ppol03036]
    X809_10035
Enzymes [BR:ppol01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     X809_10035
Messenger RNA biogenesis [BR:ppol03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     X809_10035
Ribosome biogenesis [BR:ppol03009]
Eukaryotic type
  90S particles
   RNase
    X809_10035
Prokaryotic type
  rRNA processing factors
   X809_10035
Chromosome and associated proteins [BR:ppol03036]
Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     X809_10035

SSDB

Motif

Pfam:

Ribonucleas_3_3 Ribonuclease_3 dsrm Lzipper-MIP1 DND1_DSRM Chitin_synth_1N Phage_P2_GpU

Other DBs

NCBI-ProteinID:

AHC19550

Position

2145609..2146307

AA seq 232 aa
MSGDLKQLQQKLHIQFNNRQLLKQAFTHASYVNEHRFSQHADNERLEFLGDAVLELTVSE
QLYNQYPNRPEGELTKLRAAIVCEPSLVKFAVGLEFGQYVLLGKGEELTGGRTRPALLAD
VFEAFVGALYLDQGLEAVRSFLERYIFPQIVLNGKLQMSDFKTELQELTQHHNMGMLEYK
IVEERGPAHEREFVAEVYMDSERLGAGTGRSKKEAEQQAAAVALNRLKLAES

NT seq 699 nt +upstreamnt +downstreamnt
ttgagtggagacttgaagcaattacagcagaaacttcatattcaattcaacaatcggcag
cttctgaagcaggcctttacgcacgcttcctacgtaaacgaacatcggttcagtcagcat
gcagacaatgagcgtcttgaatttttaggtgacgctgttctggaactgacggtgtccgag
caattgtacaatcagtaccctaaccgacccgaaggcgaactcaccaagctgcgtgcagct
attgtctgtgagccttctctggtgaagtttgctgtcgggcttgagtttgggcaatatgta
ctgcttggaaaaggtgaagagttgacaggtggacgtactcgtccggctctgttggctgat
gtattcgaagcgttcgtaggtgcgctttatttggatcagggtctggaggccgtccgttcg
tttctggaacgttatatttttcctcaaattgtattaaacggtaagcttcagatgagtgat
ttcaaaacagagcttcaggaactgacgcagcatcataacatggggatgcttgaatacaag
attgtagaggagcgcggaccagcccatgagcgcgagtttgtagctgaagtatatatggac
agcgaacggctaggggcaggtacaggacgctccaaaaaagaagctgagcagcaagcggcg
gcagtagctttaaaccgtttgaagctggcagaatcgtaa

All links

Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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