KEGG   Physcomitrium patens (spreading earthmoss): 112274647
Entry
112274647         CDS       T01041                                 
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial-like
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112274647
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppp03019]
    112274647
   03016 Transfer RNA biogenesis [BR:ppp03016]
    112274647
Enzymes [BR:ppp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     112274647
Messenger RNA biogenesis [BR:ppp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     112274647
Transfer RNA biogenesis [BR:ppp03016]
 Prokaryotic type
  tRNA degradation factors
   112274647
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase KH_1 S1 KhpA-B_KH KH_2
Other DBs
NCBI-GeneID: 112274647
NCBI-ProteinID: XP_024360072
Position
2:12746374..12750426
AA seq 817 aa
MVLRSRGVSSLLRAVDAAARRRRYVPSPALRSVYSSSKILDEGTLKPRGFGRNVSNFSTI
SEPVLVTVPEVPAAWRTFPASGHVFQEEAEVGNMKMSFETGKLARFASGAVVVGVGETKV
LVTVVADYKFDGGKDFLPLQVEYREKQYAQGKIPATFMRREGAPKERELLCGRLIDRSVR
PLFPKGFFYDSQIIANVLCSDGDQDPDVLAVNAASAALVISDIPWKGPIGCVRIGRVKGK
FIVNPNMDEFSLSDLNLVYACTAEKTVMIETQAREITNQDYVAALHLAHAEATKLIPPQL
ELAAKVAVLKRPLPVLTVPPEVLEKVRSLAKIAIEAVMGNPQFGKFERGQTLGAIEEEVK
NRLISEGDEVSVKLLPYAFDAVKKEVLRRNIFEKGMRVDGRGLNQVRELQCEAGTYPALH
GSSVFSRGNTQVLCTVTIGAPDDAQRLDSLVGIDRKRFMVHYSFPPFSINEVGRTGGLNR
REVGHGTLAEKALVALLPPEEDFPYSVRVTSECLASDGSSSMATVCGGSLALMDAGIPLR
SHVGAVSVGLVSVSDPETGRVTEYRILTDILGLEDHLGDMDFKIAGTKKGITAIQLDIKP
AGIPLHILCEALEPALVGRTQILDFMEQVISSPRDSTARENLPRSGTMNIQQDSIGRLIG
PQGSNIKNIQKVSDARINISGDGVVTIFARDQASFDLAKQMVEASVGKEVEVGGTYSARV
VAIKDFGAFMELNGGYQGLLHISEIAHERIERVSDYLSIGQELSVVCIGRDLRGNLKLSR
KMTLPLVVPENATQPPIPESTVPRAQASKIKQNVTGS
NT seq 2454 nt   +upstreamnt  +downstreamnt
atggtgcttcggagtcgtggggttagttcactattaagggccgtggatgctgccgctagg
cgtcggaggtatgtgccatcgccggcgttgcgaagtgtttattcctctagcaaaatcctg
gatgaaggtacactaaaaccccggggttttggaaggaatgtctcgaacttttccacgatt
agcgaacctgtcctagtaactgttccggaggtacctgcagcgtggcgaacgttccctgcc
agtggccatgtttttcaagaagaggcggaagtgggaaatatgaagatgagctttgagaca
gggaagctggcccgatttgcgtcaggggctgttgtggttggagttggtgagacgaaagtt
ttggttacagtggtggccgattacaagtttgatggaggcaaggactttctgcccttgcaa
gtagaataccgtgagaagcaatatgctcagggaaaaattccggccacctttatgaggcgt
gaaggtgcgcccaaagaaagagagcttctgtgtggtcgtctcatagacaggtcggttcgt
ccacttttccctaagggttttttctatgattctcagatcatagcaaatgtgctatgttcg
gatggtgaccaggaccctgatgtccttgctgtcaatgcagcctcagcagctctagtgatc
tcagacattccttggaaaggtccaatcggttgtgtgcgaattggtagagtgaagggaaaa
ttcatcgtcaatccgaacatggatgaatttagtttgagtgacttgaatctggtatatgca
tgcacagcagagaaaactgtgatgattgagacgcaggctcgtgagattacaaaccaggat
tatgtagccgctctgcatttggctcatgccgaggctactaagttgatcccaccgcaatta
gagttggctgctaaagtagctgtgctgaagcggcctctgccagtactcactgttccacct
gaagtattagaaaaggtcagatctcttgcaaagattgctattgaggctgtgatgggcaat
cctcaatttggcaaatttgagcgcggacaaactttgggagcgatagaagaggaggtgaag
aacagattgatctccgaaggtgacgaggtatctgtaaagcttttgccgtatgcatttgat
gcagtgaagaaagaggtgctgcggcggaacatctttgagaaaggtatgagagtggatggg
cggggtcttaaccaagtgcgcgaattgcagtgcgaggctggaacgtatccggcccttcat
ggatcctccgtattctctagaggcaacacacaggttctgtgcacagtcaccataggtgct
cctgacgatgcccaacgtttagattctcttgtcggaattgatcgaaaacgattcatggtc
cattatagttttcctcccttttctattaacgaggtcgggcgtacaggaggcctaaaccga
cgagaagttggccatggtacactagcagagaaagcattggttgcgttgctgccaccagag
gaagacttcccatacagtgttcgtgtcacttctgagtgtctggcatcggatgggtcatct
tccatggccacggtctgtggtggaagtctggcattgatggatgcaggtattccattgcgc
tcacatgtgggtgctgtctcagttggcctggtgagcgtcagtgatcctgaaactgggcgc
gtaacggagtatcgaattctcaccgatattttagggttagaagatcaccttggtgatatg
gatttcaaaattgctggtactaagaaaggtatcacagccattcagcttgatatcaaacct
gcgggcattccactgcacatcctatgtgaggcgctggagcctgcattagtcggtcgaaca
cagatcttggatttcatggaacaggtcattagtagccctcgggattctactgcccgagag
aatttgccgcgcagtggaacaatgaacatacaacaggacagtatcgggcgcttgatagga
cctcagggttcaaacatcaagaatattcagaaagtttctgacgcacgtataaacatatcg
ggagatggagttgtgacgatttttgcaagagatcaggcctcgtttgatctggcaaagcag
atggttgaagcatcagtagggaaggaagtggaggtggggggcacctattcagctagagtg
gtggcaatcaaggactttggggctttcatggaacttaatggaggttatcagggtttgctt
catatctcagaaatcgcacatgagcgcattgaacgcgtatcagactatctttccattgga
caagagttgtccgttgtctgtattggtcgtgacctgcgtggcaatctaaagctgtctcgg
aaaatgactttacccttagttgtgccagaaaatgccactcagccaccgattcctgaatct
acagtcccgagggcacaagcttctaaaatcaagcagaatgtgaccgggtcataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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