KEGG   Paenibacillus polymyxa SQR-21: PPSQR21_000740
Entry
PPSQR21_000740    CDS       T03178                                 
Symbol
lysU
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
ppq  Paenibacillus polymyxa SQR-21
Pathway
ppq00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ppq00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    PPSQR21_000740 (lysU)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ppq01007]
    PPSQR21_000740 (lysU)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppq03016]
    PPSQR21_000740 (lysU)
Enzymes [BR:ppq01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     PPSQR21_000740 (lysU)
Amino acid related enzymes [BR:ppq01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   PPSQR21_000740 (lysU)
Transfer RNA biogenesis [BR:ppq03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    PPSQR21_000740 (lysU)
 Prokaryotic type
   Other AARSs
    PPSQR21_000740 (lysU)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d CDC24_OB3
Other DBs
NCBI-ProteinID: AHM63803
Position
76285..77811
AA seq 508 aa
MSDETTNQELQENREELSELLQIRRAKLDELRSLGIDPFGRKYIRTDEAGVLLSKYDSLT
KEELEEKNIEVSIAGRIMAKRVMGKASFAHIQDLSGRIQIYVRQDTVPEANYKAFGILDL
GDIVGVKGVLFKTKTGETTIKVLDIEVLSKSLYPLPEKYHGLKDVELRYRQRYVDLIMNP
EVQKTFIMRSRIIQSMRRYLDSLGYLEVETPTLHAIAGGAAAKPFITHHNALDTQLYMRI
AIELHLKRLIVGGMEKVYEIGRVYRNEGVSTRHNPEFTLIELYEAYADYKDIMQLTENMI
AHIAQEVLGTQHIQYQGQEVDLTPQWRRVSMVDAVKEVTGVDFSVQMSNEEAHRLAKEHK
VPVEPHMTFGHILNAFFEHFVEETLIQPTFITGHPVEISPLAKKNEQDPRFTDRFELFMV
AREHANAFTELNDPIDQRQRFESQLLEREHGNDEAHQMDDDFIRALEYGMPPTGGLGIGI
DRLVMLLTDAPSIRDVLLFPHMRNRTVE
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgtcggatgaaactactaaccaggaattacaggaaaatcgcgaggaattaagtgaatta
ttgcaaattcgtcgtgccaaattggacgagcttcgctcattgggcattgatccttttgga
cgcaaatacatacgcacggatgaagcgggcgtactactgagcaagtatgacagcttgacc
aaggaagaattggaagaaaaaaatattgaagttagcatagcaggccgcattatggctaaa
cgagtgatggggaaagccagctttgctcatatacaggatcttagcggacgtattcaaatc
tatgttcgtcaagacactgtacctgaagcgaattataaagcatttggtattttggatctc
ggcgatattgttggtgttaagggcgtgctctttaaaaccaagacaggcgaaacgacgatc
aaagtattggatattgaagtcttgtccaaatccttgtatccattgccggagaaatatcat
ggtttgaaggatgttgaattgcgttatcgtcagcgttacgtagatctgattatgaaccca
gaagtacaaaaaacgttcattatgcggtcccgtattattcaatccatgcgtcgttatctg
gattcgctcggttatttggaagttgaaactccaacgttgcatgccattgctggcggggcg
gcggcgaagccatttattacacaccacaatgcattggacacgcaactttatatgcgtatt
gctattgaacttcatttgaagcgactaattgttggcggaatggagaaagtatatgagatc
ggacgtgtataccgtaacgaaggtgtatcgactcgtcataaccctgagtttacgttgatt
gagctgtatgaggcatatgctgattataaagatatcatgcaattgacggaaaacatgatt
gcacatattgcgcaggaagtactgggcacacagcacattcagtatcaaggtcaggaagtc
gatctgacgccgcaatggcgcagagtttccatggtcgatgctgttaaagaagtaacaggc
gtagactttagtgtgcaaatgagtaatgaagaagctcatcgccttgcgaaagagcataag
gttccggttgaaccgcacatgacatttggtcatatcctgaatgcattctttgagcatttt
gtagaggaaacgcttattcagccgacctttattactggacatccggttgaaatctcgcca
ttggcgaagaaaaatgaacaggacccgcgttttacggatcgcttcgagctgttcatggtc
gctcgtgagcatgcgaatgcgttcactgagctgaatgatccaattgaccagcgccaacgt
tttgaatcgcaattgctggaacgtgagcatggcaatgatgaagctcatcaaatggatgat
gactttatccgcgccttggaatatggtatgccgccaacaggcgggctgggcatcggcatc
gatcgtttggttatgttgctgacagatgcgccttccattcgcgatgtgctgcttttcccg
catatgcgtaaccgtacagtagaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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