KEGG   Paenibacillus polymyxa SQR-21: PPSQR21_033540
Entry
PPSQR21_033540    CDS       T03178                                 
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--d-alanyl-d-alanine ligase
  KO
K01929  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
Organism
ppq  Paenibacillus polymyxa SQR-21
Pathway
ppq00300  Lysine biosynthesis
ppq00550  Peptidoglycan biosynthesis
ppq01100  Metabolic pathways
ppq01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:ppq00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PPSQR21_033540 (murF)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PPSQR21_033540 (murF)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    PPSQR21_033540 (murF)
Enzymes [BR:ppq01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     PPSQR21_033540 (murF)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: AHM66992
Position
complement(3817647..3819050)
AA seq 467 aa
MKRTIGQIASMCGGTLHAQADAERMVEGVFTDSRRPQSLGLFVPLAGERFDGHHYVQQIV
SEGGATAYLWQKDHGTPPSVNAIEVEDTLEALQHLAAAYLRETDVSVVGITGSNGKTTTK
DIVNALLGTTFKVHKTEGNYNNHIGLPLTVLSMPQDTDILILEMGMSGRGEIRLLANIAQ
PDVAVITNIGESHLLQLGSRTEIARAKLEIASGIKPGGLLIYNGDEPLLPQVLAEPETVK
PEGLNSFTFGLAADNDDYPIEITSDEEGSSFITAQSGQEAFRLPLLGQHNVVNGLAALAV
ARHFNVDVDHIRKGLSSLKLTGMRIEVVKCSDGLTVLNDAYNASPASMKAAIQTLSAYQT
GGRKIAVLGDMLELGAEETQFHEEIGRFAAKHNIEALFTYGALGASIAQGAQGTMPTANV
HAYTDKQKLIQHLQSYLHANDIVLVKASRGMRLEEIVDALKNGPLQN
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgaaaagaacaatcggtcagattgcatccatgtgtggaggaacacttcacgcacaggcg
gacgctgaacggatggttgagggcgtttttacagactcacgcaggccgcagagtctggga
ctgttcgttccactcgcgggtgaacgatttgatggacatcattatgttcagcagatcgta
agcgagggaggggcaacagcatatttatggcaaaaggatcatggaacacctccgtccgtc
aatgctattgaggtcgaggatacgttagaagcccttcagcatctagcggccgcatacttg
cgcgaaactgacgtttctgtcgtcggaatcacgggaagcaacggcaagacaacgacgaaa
gatattgtaaatgctctattgggcacgacttttaaagtacacaaaaccgaaggaaattat
aacaatcatatcgggttgcctttaacagtactgtccatgccgcaggatacagatatcctg
attctggagatgggcatgagtggacgcggggaaatccgtctgttggctaatattgcccaa
ccagatgtagctgtcataactaacattggcgaatcgcatttacttcagcttggttctcgc
actgaaattgctcgtgcaaagctggaaattgcaagtgggattaaacccggtggactgctt
atttataatggggatgaaccactacttccacaagtgttggcagaacctgaaacggtcaag
cctgaaggattaaattcattcacgttcgggttagctgcggacaatgatgattatccaatt
gaaatcacttcggatgaagaaggtagctcattcataacagcccaatccggccaagaggct
ttccggcttcccttgcttggacagcacaatgttgtaaacgggttggcagcgctggcggta
gcacgacatttcaatgtggatgtagaccatatacgtaaaggattgtcgtctttaaagctg
acgggcatgcgcattgaggtcgtgaagtgttcggatggacttaccgtgctaaatgacgct
tacaatgccagtcctgcttcaatgaaggctgcaattcagacgttgtctgcatatcaaacg
ggtggacgtaaaattgccgtacttggtgacatgctggaactgggcgctgaggaaacgcaa
tttcatgaggaaattgggcgttttgctgcaaagcataacatagaggcactgtttacctat
ggtgcgttaggcgcttcgattgcgcagggtgcgcaagggacaatgccaactgctaacgta
cacgcttatacagataagcaaaagctgatccagcatttgcagtcttatctccatgccaat
gatattgtgctggttaaggcatccagagggatgcgattggaagaaattgtggatgcgctg
aaaaacggtccgctacagaactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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