KEGG   Paenibacillus polymyxa SQR-21: PPSQR21_045650
Entry
PPSQR21_045650    CDS       T03178                                 
Symbol
clpA
Name
(GenBank) ATPase AAA
  KO
K03696  ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ppq  Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:ppq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ppq03110]
    PPSQR21_045650 (clpA)
Chaperones and folding catalysts [BR:ppq03110]
 Heat shock proteins
  HSP100
   PPSQR21_045650 (clpA)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 Clp_N ClpB_D2-small AAA AAA_5 AAA_16 Sigma54_activat AAA_22 nSTAND3 AAA_18 IstB_IS21 RuvB_N UVR TniB AAA_14 ATPase_2 Mg_chelatase AAA_7 Zeta_toxin AAA_28 DNA_pol3_delta2 VapE-like_dom Roc AAA_3 NACHT bpMoxR Torsin AAA_23 T2SSE DUF848 DUF87 FapA
Other DBs
NCBI-ProteinID: AHM68153
Position
complement(5141453..5143897)
AA seq 814 aa
MMFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKI
QDEVETLIGRGQEQPTNIAYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVA
ARVLNNLGISLNKARQQVLQLLGSSEAVSSHHGAPANVSTPTLDSLARDLTASAKENNLD
PVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVM
TLDMGSVVAGTKYRGEFEDRLKKIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNIL
KPALARGELQCIGATTLDEYRKYIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEA
HHRVKITDEAIEAAVRLSDRYITDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKQLENRL
EDIRKEKDSAVQSQEFEKAAALRDTEQKIREELDVTKNQWKEQQGRTDSEVTPEDIAQVV
AIWTGVPVSKLKEEETHRLLNMEQLLHERVIGQDEAVKAVSRAIRRARAGLKDPKRPIGS
FIFLGPTGVGKTELARALAESMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGG
QLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV
GAQAIKRNSTLGFTAVVDAGADYDNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHI
AEIVSLMSEELRKRLNEYEVDFELTDKAKNFLAKEGFDPAYGARPLRRAIQKHIEDRLSE
ELLTGNISKGDSLYIDEENGALTVTKKDNVSAKS
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgatgtttggaagatttacggaacgtgcacagaaagtgcttgccttggcccaggaagaa
gctgttcgattgggacacaacaacattggcacagagcacattttgctaggactcattcgt
gaaggtgaaggaatagcagcgaaagccttaatcggtttagggctgggactggaaaaaatc
caggatgaagtggaaacactgattggacgcggtcaagagcaaccgacgaacattgcctat
actccacgtgccaagaaagtcattgagctgtctatggacgaagcacgtaaattgggtcat
acctatgtaggtaccgagcatattttgctaggccttattcgtgaaggtgaaggcgtagca
gcacgtgtactgaacaacctgggtatcagtctgaacaaagcgcgtcagcaagtgcttcaa
ttgctcggcagcagcgaggcggtttccagccatcacggtgctccagctaatgtcagcaca
ccaactctggacagtctggcacgcgatctgacggcatctgcgaaggaaaataacctggac
cccgttattgggcgcagcaaggaaattgagcgcgttattcaagtgctcagccgtcgtaca
aagaacaatcctgttttgatcggtgaacctggggtaggtaaaacggcgattgccgaagga
ttggcacaaaaaatcatagcgaatgagattcccgaaacgttgcgcgacaaacgcgtaatg
acactcgatatgggttctgtagtagcaggtactaagtatcgtggtgaatttgaggatcgc
ttgaagaagattatggacgagattcgtcaagctggaaatatcgtattgttcattgatgag
ctgcatacgctgattggtgctggtggagcggaaggcgcaattgatgcgtccaacatcctg
aaacctgctctggcacgtggcgagctgcaatgtatcggtgccaccacgctggatgaatac
cgcaaatatattgagaaagatgctgctttggagcgtcgttttcaacctataaccgtggat
caaccttctccagaagaagcgattcaaatcttgtatggtctgcgcgaccgttacgaagcg
catcaccgtgtgaaaatcactgatgaggctattgaagctgcagtaagattgtcagatcgt
tatattacggatcgcttcctaccggataaggctattgatcttattgatgaagcgggctcc
aaggtaaggctgaattcctatacagtaccgccaaacctgaaacagctggaaaaccgtctg
gaagatatccgtaaggaaaaagattcagcggtacaaagccaggagtttgaaaaggcagct
gcgctgcgcgatacagagcaaaaaattcgtgaagagctggatgtcactaaaaaccaatgg
aaagaacaacaggggcgtacagattccgaagttacaccagaggatattgctcaggttgtt
gccatctggactggtgtcccagtcagcaagctgaaggaagaagaaacacatcgtttgctg
aatatggagcaactgttgcatgaacgggtgattgggcaggacgaagctgttaaggcagta
agtcgggcgattcgccgggcacgcgccggtctgaaagatccgaaacgtccaatcggctcc
tttattttcctcggtccaactggggttggtaaaacagagctggcacgcgccttggctgaa
tctatgtttggtgatgaaaatgcggttatccgtattgatatgtccgaatatatggagaaa
cactccacatcccgtttggtaggagcgcctccagggtacgtaggatatgaagaaggtggc
caactgactgagaaggtacgtcgtaagccttactctgtggtattgttggatgaaattgaa
aaagcacacccggaagtattcaatattctgctgcaagtgttggaggatggacgtctgacg
gattccaaaggacgtgttgttgacttccgtaacacactcatcatcctaacatccaacgtt
ggtgcacaggcgatcaagcgtaactccacgcttggctttacagctgttgtggacgctggg
gcggattacgataacatgaagggcaaagtgatggatgaactgaagaagagcttccgtcct
gagttcttgaaccggatagatgaaatcatcgtgttccattctctcgaagaaaaacatatt
gccgaaattgtttcactcatgtctgaggagctgcgtaagcgtctgaatgagtatgaggtt
gactttgagttgacagacaaggctaagaatttccttgccaaggaaggcttcgatccagcg
tatggtgcgcgtccattgcgtcgtgcaatccagaagcatattgaagatcgcctgtccgag
gaactgttgactggaaacatttctaaaggcgactctctctacattgatgaagagaacggt
gcattgacagtaacgaaaaaggataatgtatccgcgaagtcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (33)   
   Pfam (33)   
All databases (39)   

Download RDF
DBGET integrated database retrieval system