KEGG   Photobacterium profundum: PBPRA3045
Entry
PBPRA3045         CDS       T00173                                 
Symbol
S2901
Name
(GenBank) putative autoinducer-2 production protein LuxS
  KO
K07173  S-ribosylhomocysteine lyase [EC:4.4.1.21]
Organism
ppr  Photobacterium profundum
Pathway
ppr00270  Cysteine and methionine metabolism
ppr01100  Metabolic pathways
ppr01230  Biosynthesis of amino acids
ppr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    PBPRA3045 (S2901)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PBPRA3045 (S2901)
Enzymes [BR:ppr01000]
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.21  S-ribosylhomocysteine lyase
     PBPRA3045 (S2901)
SSDB
Motif
Pfam: LuxS
Other DBs
NCBI-ProteinID: CAG21373
UniProt: Q6LMV3
Position
1:complement(3488390..3488917)
AA seq 175 aa
MDVMPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFCRPNMDILSERGIHTLE
HLYAGFMRNHLNSERVEIIDISPMGCRTGFYMSLIGTPSEQDVAAGWTAAMEDVLNVESQ
DQIPELNEYQCGTYSMHSLEEAKDIAKTILAEGINVNKNDELALPESMLKELDVK
NT seq 528 nt   +upstreamnt  +downstreamnt
atggatgttatgccgttattagatagttttactgttgatcatacgcgaatgaatgcccct
gcggtacgtgtggcaaaaaccatgcaaacgccaaaaggtgacacaatcacagtatttgat
cttcgtttctgtcgtcctaatatggatattttaagtgagcgtggaattcatacacttgag
cacctatacgcaggctttatgcgtaaccacttgaattcagaacgtgtagaaattattgat
atctcgccaatggggtgtcgtacgggtttttacatgagtttaattggcacacctagcgag
caagatgttgcagctggttggacagcagccatggaagatgtactaaacgtcgagtcgcaa
gatcaaatcccagaattgaatgaataccagtgtggtacatacagtatgcattcattagaa
gaagcaaaagacattgctaaaacaattcttgctgaagggattaatgttaataagaacgac
gaattagccttgcctgaaagcatgttgaaagagcttgatgtaaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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