KEGG   Photobacterium profundum: PBPRA3089
Entry
PBPRA3089         CDS       T00173                                 
Symbol
RNC
Name
(GenBank) putative ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ppr  Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:ppr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppr03019]
    PBPRA3089 (RNC)
   03009 Ribosome biogenesis [BR:ppr03009]
    PBPRA3089 (RNC)
   03036 Chromosome and associated proteins [BR:ppr03036]
    PBPRA3089 (RNC)
Enzymes [BR:ppr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PBPRA3089 (RNC)
Messenger RNA biogenesis [BR:ppr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PBPRA3089 (RNC)
Ribosome biogenesis [BR:ppr03009]
 Eukaryotic type
  90S particles
   RNase
    PBPRA3089 (RNC)
 Prokaryotic type
  rRNA processing factors
   PBPRA3089 (RNC)
Chromosome and associated proteins [BR:ppr03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PBPRA3089 (RNC)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: CAG21405
UniProt: Q6LMS2
Position
1:complement(3529815..3530489)
AA seq 224 aa
MTSPANRLQRRLGYQFNSSELMTLSLTHRSANGKHNERLEFLGDSILSFVIADDLYHRFP
HVDEGDMSRMRATLVRGKTLAELGREFELGDYLLLGPGELKSGGFRRDSILADCVEAIIG
AIYLDSDTEQVRKVILSWYQSRLETIQPGINQKDPKTRLQECLQGRRLALPAYTVTKVHG
EAHNQEFTVQCEVTGLDKPVIGKGSSRRKAEQAAAELALKQLES
NT seq 675 nt   +upstreamnt  +downstreamnt
atgacatctcctgcgaataggctccagcgtaggctggggtatcaatttaatagtagcgaa
ttgatgacattatcactgacacaccgcagtgctaatggaaagcataacgaacgcttagaa
tttttaggcgattcgatcttaagctttgttattgccgatgacttatatcaccgttttcct
catgtggatgaaggtgatatgagccgtatgcgagcaacgctggttcgtggtaaaacgctc
gctgagttgggccgtgaatttgaacttggtgattatttattactgggtcctggtgaactg
aaaagtggcggattccgtcgtgattcaattctagcagattgcgtagaagcgattatcggt
gcaatttatctggacagtgatacggaacaggtacgtaaggttattctatcttggtatcag
tctcgtcttgaaacgattcaacctggcattaaccagaaagatcctaaaacacgtctgcaa
gagtgtttacaaggtcgtcgtttagcacttccagcgtatactgtaactaaggtgcatggt
gaagctcataatcaagagttcacggtgcaatgtgaagtgacgggcttggataagcctgtt
attggtaaaggcagcagtcggcgcaaggcagagcaggcagcagcagaacttgcgcttaag
cagttggaatcatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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