KEGG   Photobacterium profundum: PBPRA3198
Entry
PBPRA3198         CDS       T00173                                 
Symbol
C0129
Name
(GenBank) putative AmpD protein
  KO
K03806  N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
Organism
ppr  Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:ppr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppr01011]
    PBPRA3198 (C0129)
Enzymes [BR:ppr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.28  N-acetylmuramoyl-L-alanine amidase
     PBPRA3198 (C0129)
Peptidoglycan biosynthesis and degradation proteins [BR:ppr01011]
 Peptidoglycan biosynthesis and degradation
  Amidase
   PBPRA3198 (C0129)
SSDB
Motif
Pfam: Amidase_2
Other DBs
NCBI-ProteinID: CAG21504
UniProt: Q6LMH3
Position
1:complement(3634275..3634832)
AA seq 185 aa
MLTINDTHWVEGVKHVPSPFFDQRPDAQDVSLLVVHNISLPPGEFGGPYIEQLFTGKLDP
NEHPYFGLISGFRVSAHCLIRRNGDIIQFVPFDCRAWHAGVSQFAKRDKCNDYSIGIELE
GTDTLPYTQAQYATLTELSRVIMTLYPHIDSSRITGHEFIAPGRKTDPGLAFDWHAFKAT
LRVNG
NT seq 558 nt   +upstreamnt  +downstreamnt
atgttaacaattaacgacacccactgggtggaaggcgtcaaacatgtgccgtcaccattt
tttgatcagcgccccgatgcgcaagatgtgtctttgctggtggtacacaatattagtttg
ccaccaggggagtttggtggaccgtatattgaacagctgtttacggggaagctggatccg
aacgaacatccctatttcgggttaatttcagggtttcgtgtgtctgctcactgtttaatt
aggcggaatggcgatatcattcaatttgtaccgtttgattgtcgggcatggcatgctgga
gtgtcacaatttgccaagcgcgacaaatgcaatgattattctattggtatagagctggaa
ggaacggacaccctcccttatacccaagctcagtatgcaacactgactgagttatctcgg
gttatcatgacactgtatccacatatcgattcttcccgtattactgggcatgaatttatt
gcgcctgggcgaaaaacagatcccggtttagcgtttgattggcatgcatttaaagcaaca
ttgcgtgtgaatggataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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