KEGG   Pseudomonas protegens CHA0: PFLCHA0_c57260
Entry
PFLCHA0_c57260    CDS       T02671                                 
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase DbpA
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
pprc  Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:pprc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pprc03009]
    PFLCHA0_c57260 (dbpA)
Enzymes [BR:pprc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     PFLCHA0_c57260 (dbpA)
Ribosome biogenesis [BR:pprc03009]
 Prokaryotic type
  rRNA helicases
   PFLCHA0_c57260 (dbpA)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 PRAI
Other DBs
NCBI-ProteinID: AGL87454
UniProt: A0A2C9EUW1
Position
6370628..6372013
AA seq 461 aa
MTTIATAFNTLPLSPAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALVICPTRELADQVAKEVRRLARAEDNIKVLTLCGGVSFGPQIA
SLEHGAHIIVGTPGRIQQHLRKGSLVLDGLNTLVLDEADRMLDMGFYDAIEDIIEKTPSR
RQTLLFSATYPVGIKQLASKFMRDPQTVKAEAFHDDTQIEQRFYEISPEERMSAVTKVLH
HFRPASCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLVAPSEAHRAQAIE
QLQKAPLNWDQVDNLKSQGGAPLQPPMSTLCIAGGRKDKVRPGDILGALTGDAGIPGAQV
GKIAIFDFQSYVAVERTVVMQALQRLNNGKIKGRSLRVRVL
NT seq 1386 nt   +upstreamnt  +downstreamnt
gtgaccaccattgccaccgcttttaatactttgcccctgtctcccgccatgctggctaac
ctcgactccctcggttatgcccagatgacgccgatccaggcgcagagcttgccggtgatc
ctcaagggcatggacctgatcgcccaggccaagaccggcagcggcaagaccgcggccttc
ggcatcggcctgctgaacccgatcaacccgcgctacttcggctgccaggccctggtgatc
tgcccgactcgcgagctggccgaccaggtggccaaggaagtgcgccggctggctcgcgcc
gaagacaacatcaaggtcctgaccctgtgcggcggcgtgtcgttcgggccacagatcgcc
tccctggagcacggtgcgcatatcatcgtcggcaccccagggcgtatccagcagcatctg
cgcaagggttcgctggtgctcgacggcctgaacacgctggtgctcgacgaagccgaccgc
atgctcgacatgggcttctacgacgccatcgaagacatcatcgaaaagaccccgtcgcgc
cgccagaccctgctgttctccgccacgtacccggtgggcatcaagcaactggcgtcgaaa
ttcatgcgcgatccgcaaacggtgaaagccgaagcgttccacgacgatacgcagatcgag
cagcgcttctacgagatttcaccggaagagcgcatgagcgcagtgaccaaagtcctgcac
cacttccgcccggcctcctgtgtggcgttctgcttcaccaagcagcaagtgcaggaaacc
gtcgatcacctgaccgccaaaggcatctccgctgtcggcctgcacggcgacctggagcag
cgtgaccgcgatcaggtgctggcgatgtttgccaaccgcagcacatcggtactggtcgcc
accgacgttgccgcccgtggcctggacatcgatgcgctggacatggtgatcaacgtcgag
ctggcccgcgattcggaaatccacattcaccgcgttggccgtaccggtcgcgctggcgag
aaaggcatcgcggtcagcctcgtcgcaccgtccgaagcccatcgcgcgcaagccatcgaa
caactgcagaaagccccgttgaactgggatcaggtcgataacctcaagtcccagggcggc
gccccgctgcagccaccgatgagcacgttgtgcatcgccggcgggcgcaaggacaaggta
cgtccgggggatattctcggcgcactgaccggcgacgccggcatcccgggcgcccaggtc
ggcaagatcgcgatcttcgacttccagtcgtatgtggcggttgagcgcaccgtggtcatg
caggcgctgcagcgcctgaacaacggcaagatcaagggccgttcgctgcgcgtgcgcgtc
ctctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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