KEGG   Pseudomonas protegens Cab57: PPC_5278
Entry
PPC_5278          CDS       T03613                                 
Name
(GenBank) clpB protein
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ppro  Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:ppro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ppro03110]
    PPC_5278
Chaperones and folding catalysts [BR:ppro03110]
 Heat shock proteins
  HSP100
   PPC_5278
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small AAA Clp_N AAA_5 AAA_22 AAA_16 Sigma54_activat IstB_IS21 nSTAND3 AAA_18 AAA_24 Mg_chelatase ATPase_2 AAA_14 TniB AAA_7 bpMoxR DNA_pol3_delta2 AAA_3 NACHT ABC_tran PduV-EutP ATP_bind_1
Other DBs
NCBI-ProteinID: BAO64625
Position
complement(5850870..5853434)
AA seq 854 aa
MRIDRLTSKLQLALSDSQSLAVGLDHPAIEPAHLMQALLEQQGGSIKPLLMQVGFDVNSL
RKELSKELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENS
KLGKLLLGQGVSKKALENAINNLRGGEAVNDANVEESRQALDKYTVDLTKRAEDGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSL
DMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLK
PALARGELHCVGATTLNEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVH
HKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLI
QLKVESQALKKEDDEAAIKRLEKLQEEIVRLEREYADLEEVWTSEKAEVQGSAQIQQKIE
QSRQELEAARRKGDLNRMAELQYGVIPDLERSLQMVDQHGHSENQLLRSKVTEEEIAEVV
SKWTGIPVSKMLEGERDKLLKMESLLHERVIGQNEAVVAVANAVRRSRAGLSDPNRPSGS
FMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL
GSAQIQELVGDREAQRAAVMDAVSTHFRPEFINRVDEVVIFEPLARDQIAGITQIQLGRL
RSRLAERELSLELSDEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILSGGFLPGA
TVTASVQDDEIVFA
NT seq 2565 nt   +upstreamnt  +downstreamnt
atgcgtatagaccgattaaccagcaaattgcagctggccttatccgattctcaatctctg
gcggttggcctcgatcatccggccattgaaccggcgcacctgatgcaggcgctgctggaa
cagcagggcggctcgatcaagcctctgctgatgcaggtgggcttcgacgtcaacagcctg
cgcaaggaactgagcaaagagctcgaccagctgccgaaaatccagaaccccactggcgac
gtcaacatgtcccaggatctggcgcgtctgctcaaccaggccgaccgcctggcgcagcag
aaaggcgaccagttcatctccagcgagctggtgctgctggccgctatggatgagaacagc
aaactcggcaaattgttgctgggccagggcgtgagcaagaaagccctggagaacgccatc
aacaacctgcgtggcggtgaggcggtgaatgacgccaacgtcgaagagtcgcgccaggcc
ctggacaagtacaccgtcgacctgaccaagcgcgccgaagacggcaagcttgatccggta
atcggccgtgacgacgaaattcgccggaccatccaggtgctgcaacgccggaccaagaac
aatccggtgctgattggtgaaccaggcgtgggtaagaccgccatcgccgaaggcctggcc
cagcggatcatcaacggcgaagtgcccgatggcctcaaaggcaagcgcttgctgtccctg
gacatgggcgccttgatcgccggcgccaaataccgtggcgagttcgaagaacgcctgaaa
tccctgcttaatgaactgtcgaagcaggaagggcagatcatcctgttcatcgacgagctg
cacaccatggtcggcgctggtaaaggcgaaggctcgatggatgcgggcaacatgctcaag
cccgccctggcccgtggcgagctgcactgcgtgggcgccaccacgctcaacgaataccgc
caatatatagagaaggacgcggccctcgagcggcgcttccagaaagtgttggtggatgag
ccgagcgaggaagacaccattgccatcctgcgcggcctgaaagagcggtatgaggtgcac
cacaaggtggcgatcaccgacggcgcgatcattgccgcggccaagctcagccatcgttac
atcaccgatcggcagttgccggacaaggccatcgacctgatcgacgaggccgccagccgc
atccgtatggagatcgactccaagccggaagtgctggaccgtctggagcggcgcctgatt
cagctcaaggttgaatcccaggccctgaagaaagaagacgacgaggccgcgatcaagcgc
ctggaaaaactccaggaagagattgtccgcctggagcgtgaatatgctgacctggaagaa
gtctggacctcggagaaagccgaagtgcagggttctgcgcagatccagcagaagatcgag
cagtcgcgccaggaactggaagcggcgcgtcgtaaaggcgatctcaatcgcatggccgag
ctgcagtacggggtgatcccggacctggagcgcagcctgcagatggtcgaccagcacggc
cacagcgagaaccagttgctgcgcagcaaggttaccgaggaagagattgccgaagtggtg
tccaagtggaccggcattccagtgtcgaaaatgcttgaaggcgagcgcgacaagctgctg
aagatggaaagcctgctgcacgagcgggtgattggccagaacgaagccgtggtggcggtg
gccaacgctgtgcgccgttcccgagccgggttgtccgacccgaaccggcccagcggttcg
ttcatgttcctcggcccgaccggcgtgggtaagaccgagttgtgcaaggccctggcggaa
ttcctcttcgataccgaagaggccatggtgcggatcgacatgtccgagttcatggagaaa
cattccgtggctcgcctgatcggtgcgccaccaggctatgtcggttatgaagagggcggt
tacctgaccgaagccgtgcgtcgcaagccgtactcggtgattcttctggacgaagtcgag
aaggcgcacccggatgtgttcaacatcctgctgcaggtcctggaagatggccgtctgacg
gacagccacgggcgtaccgtggactttcgcaatacggtgatcgtcatgacctccaacctg
gggtcggcgcagatccaggagctggtaggggatcgcgaggcacaacgtgcggcggtgatg
gacgcggtgtccacccacttccggccggagttcatcaaccgggtcgacgaagtggtgatc
ttcgagcctctggcacgggatcagatcgccggcatcacgcagatccagttgggtcgcctg
cgcagtcgcctggcggagcgcgagctgagcctggaactgagcgacgaggccttggacaag
ctgatcgctgtgggttacgacccggtgtatggcgcacggccgctgaaacgggccatccag
cgctggatcgagaacccgttggcgcagttgatcctctccggcggtttcctgccgggagcc
acggttaccgcctcggtgcaggacgacgaaatcgtcttcgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (25)   
   Pfam (25)   
All databases (31)   

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