KEGG   Pseudomonas pseudoalcaligenes: BN5_0188
Entry
BN5_0188          CDS       T03772                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
ppse  Pseudomonas pseudoalcaligenes
Pathway
ppse00300  Lysine biosynthesis
ppse00470  D-Amino acid metabolism
ppse01100  Metabolic pathways
ppse01110  Biosynthesis of secondary metabolites
ppse01120  Microbial metabolism in diverse environments
ppse01230  Biosynthesis of amino acids
Module
ppse_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppse00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BN5_0188 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BN5_0188 (lysA)
Enzymes [BR:ppse01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     BN5_0188 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: CDM38802
UniProt: W6QQM0
Position
complement(194330..195577)
AA seq 415 aa
MEAFNYRDGELFAEGVALSALAQRFGTPTYVYSRAHIEGQYRAYADALAGMPHLVCFAVK
ANSNIGVLNVLARLGAGFDIVSSGELERVLAAGGEPSRIVFSGVGKSRDDMRRALEVGVH
CFNVESSVELERLQKVAAELGVKAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIEQAEA
VYARAAELPNLEVIGVDCHIGSQLTTLEPFLDALDRLLLLVDKLAARGITIKHLDLGGGL
GVQYRDEQPPLAGDYITAVRKRLQGRDLGLVFEPGRFIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVSPVQPREGESRNYDLVGPICETGDFLAKDRQLVLAEGD
LLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQAYEVRRRETVQELYAGESLLPA
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggaagccttcaactaccgcgacggtgagctgttcgcggaaggcgttgccttgtccgcg
ctggcccagcgcttcggcacgcccacctacgtctattcccgcgcccatatcgaagggcag
taccgcgcctatgccgatgccctggccggcatgccgcacctggtctgcttcgcggtcaag
gccaactccaatatcggcgtgctgaacgtattggcgcgcctcggtgccggcttcgacatc
gtctccagcggtgagctggagcgcgtcctggccgccggtggcgagcctagccgcatcgtc
ttctccggcgttggcaagagccgcgacgacatgcgccgcgcgctggaagtcggcgtgcac
tgcttcaacgtcgagtccagcgtcgagctggagcgcctgcagaaggtcgctgccgaactg
ggcgtcaaggcgcccgtctcgctgcgggtcaatccggacgtggacgccggcacccacccg
tacatttccactggcctcaaggaaaacaagttcggcatcgacatcgagcaggccgaggcg
gtctacgcccgcgctgccgagctgccgaacctggaagtgatcggcgtcgactgccacatc
ggttcgcagttgaccaccctcgaacccttcctcgatgccctggatcgcctgttgctgctg
gtcgacaagctggccgcgcgcggtatcaccatcaagcatctggatctcggtggtggcctt
ggcgtgcagtaccgcgacgagcagccgccgctggccggcgactacatcaccgccgtgcgc
aaacgcctgcaaggtcgcgacctgggcctggtgttcgaaccgggccgcttcatcgtcgcc
aacgccggcgtgctgctgactcaggtggaatacctcaagcacaccgagcacaaggacttc
gccatcgtcgatgcggcgatgaacgatctgatccgccccgccctgtatcaggcgtggatg
gacgtgtcgccggtgcagccgcgtgaaggcgagtcgcgtaactacgacctggtcggaccg
atctgcgagaccggcgacttcctggccaaggatcgtcagttggtgctggccgagggtgac
ctgctggccgtgcgctcggcaggcgcctatggcttcgtcatgagctccaactacaacacc
cgcggccgcgccgccgaggtgctggtggatggcgaacaggcttatgaagtgcgtcgtcgc
gagacagtccaagagctctatgccggcgaaagcctgctgccggcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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