KEGG   Pseudomonas pseudoalcaligenes: BN5_3957
Entry
BN5_3957          CDS       T03772                                 
Symbol
thiI
Name
(GenBank) Thiamine biosynthesis protein thiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
ppse  Pseudomonas pseudoalcaligenes
Pathway
ppse00730  Thiamine metabolism
ppse01100  Metabolic pathways
ppse01240  Biosynthesis of cofactors
ppse04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:ppse00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    BN5_3957 (thiI)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    BN5_3957 (thiI)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppse03016]
    BN5_3957 (thiI)
Enzymes [BR:ppse01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     BN5_3957 (thiI)
Transfer RNA biogenesis [BR:ppse03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    BN5_3957 (thiI)
SSDB
Motif
Pfam: ThiI THUMP QueC Rhodanese tRNA_Me_trans YlxR
Other DBs
NCBI-ProteinID: CDM42499
UniProt: W6RKV5
Position
complement(4075229..4076803)
AA seq 524 aa
MEKAYFGAPTWGCSIFGQSLNNFRYNSRPCFFVPQAGGLFMKLIVKVFPEITIKSRPVRK
QFIRQLGKNIRSVLRDLDPALRVTGVWDNLEVETDLDDPKLLAEMTERLRNTPGIGLFLE
VNEYPLGDLDEITEHCKRHYADQLPGKIFAVRCKRGGKHAFSSIDVERHVGSRLRQECGA
AGIDLKKPDVEVRMEIRDQRLFVVHNRHEGLGGYPLGSLEQTLVLMSGGFDSTVAAYQMM
RRGLVSHFCFFNLGGRAHELGVMEVAHYIWQKFGRSQRVLFVSVPFEEVVGEILGKVDNS
QMGVILKRMMLRAATRVAEKLQIEALVTGEAISQVSSQTLTNLAVIDSATDMLVMRPLIA
SHKQDIIDTATQIGTAEFAKNMPEYCGVISVNPTTKARGYRVEKEEAQFDMAILDRALER
ATQLPIDRVIDELGKDVQVEEVREALAGHIVIDIRHPDAAEDEPLDVPGVEVQALPFYAL
NNKFKELDENRQYLLYCDKGVMSRLHAHHLLSEGHANVRVYRPT
NT seq 1575 nt   +upstreamnt  +downstreamnt
atggaaaaggcctattttggtgcgccaacttggggttgcagtatttttggtcaaagcttg
aacaatttccgctataattcgcgcccctgttttttcgtcccccaagcgggcggcctattc
atgaagctgatcgtcaaagttttcccggaaatcaccatcaagagccgcccggtgcgcaag
cagttcattcgccagttggggaagaacattcgctccgtgctgcgtgatcttgaccctgct
ctgcgggtcacgggtgtctgggataacctcgaggtcgagaccgacctggacgatcccaag
ctgctggccgagatgaccgaacgcctgcgcaacacgccgggcattggtctgttcctcgag
gtgaatgagtacccgctgggcgatctggacgagatcaccgaacactgcaagcgccactac
gccgaccagttgccgggcaagatcttcgccgtgcgttgcaagcgtggcggcaagcacgcg
ttcagctcaatcgatgtcgaacgccatgtcggttcacgtctgcgtcaggagtgcggtgca
gccggtatcgacctgaagaaaccggacgtcgaagtgcgcatggaaattcgcgaccagcgc
ctcttcgtggtgcataaccgccacgaaggcctcggcggttacccgctgggctcgttggaa
cagaccctggtgctgatgagcggcggcttcgactccaccgtcgcggcctatcagatgatg
cgccgcggcctggtcagccacttctgcttcttcaatctcggtggccgtgcccatgaactg
ggcgtgatggaagtggcgcactatatatggcagaagttcggccgctcgcagcgtgtgctg
ttcgtcagcgtgccgttcgaggaagtggtcggcgagattctcggtaaggtcgacaacagc
cagatgggtgtgatcctcaagcgcatgatgctgcgcgccgccacccgtgttgccgaaaaa
ctgcagatcgaagcgctggtcaccggtgaggcgatcagccaggtgtcgagccagaccctg
accaacctggcggtgatcgattcggcgaccgacatgctggtgatgcgcccgctgattgcc
agccacaagcaggacatcatcgacaccgccacgcaaatcggtaccgccgagttcgccaag
aacatgcccgaatactgcggcgtgatctcggtcaacccgaccaccaaggcccgcggttac
cgcgtggagaaggaggaggcgcagttcgacatggccatcctcgatcgcgccctggaacgc
gccacccaactgcccatcgaccgcgtcatcgacgaactgggcaaggatgtgcaggtcgag
gaagtgcgtgaggcgctggccgggcacatcgtcatcgacatccgccaccccgacgccgcc
gaagacgagccgctcgacgtgccgggtgtcgaggtgcaggcgctgccgttctatgctttg
aacaacaaattcaaggaactggatgagaaccgccagtacctgctgtattgcgacaagggc
gtcatgagccgcctgcatgcccaccatctgctgagcgaggggcatgccaatgtgcgcgtt
tatcgtccgacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system