KEGG   Pseudomonas putida S16: PPS_3838
Entry
PPS_3838          CDS       T01570                                 
Name
(GenBank) FAD linked oxidase domain-containing protein
  KO
K26063  (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
ppt  Pseudomonas putida S16
Pathway
ppt00310  Lysine degradation
ppt01100  Metabolic pathways
ppt01120  Microbial metabolism in diverse environments
Module
ppt_M00960  Lysine degradation, bacteria, L-lysine => D-lysine => succinate
Brite
KEGG Orthology (KO) [BR:ppt00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    PPS_3838
SSDB
Motif
Pfam: FAD-oxidase_C FAD_binding_4 Fer4_8 BBE CCG Bac_luciferase Fer4_20
Other DBs
NCBI-ProteinID: AEJ14379
UniProt: F8FWL4
Position
complement(4329204..4332224)
AA seq 1006 aa
MIAQLPTVAPSANYPEFLEALRNSGFRGQISADYGTRTVLATDNSIYQRLPQAAVFPLDA
DDVARVATLMAEGRFQQVKLTPRGGGTGTNGQSLTDGIVVDLSRHMNKILEINVEERWVR
VQAGTVKDQLNAALKPHGLFFAPELSTSNRATVGGMINTDASGQGSCTYGKTRDHVLELH
SVLLGGERLHSLPIDDAALEQACAAPGRVGEVYRMAREIQETQADLIEATFPKLNRCLTG
YDLAHLRDEQGRFNLNSVLCGAEGSLGYVVEAKLNVLPIPKYAVLVNVRYTSFMDALRDA
NALMAHKPLSIETVDSKVLMLAMKDIVWHSVAEYFPADPERPTLGINLVEFCGDEPAEVN
AKVQAFIQHLQNDTSVERLGHTLAEGAEAVTRVYTMRKRSVGLLGNVEGEVRPQPFVEDT
AVPPEQLADYIADFRALLDGYGLAYGMFGHVDAGVLHVRPALDMKDPAQAALVKPISDAV
AALTKSYGGLLWGEHGKGLRSEYVPEYFGELYPALQRLKGAFDPHNQLNPGKICTPLGSA
EGLTPVDGVTLRGDLDRTIDERVWQDFPSAVHCNGNGACYNYDPNDAMCPSWKATRERQH
SPKGRASLMREWLRLQGEADIDVLAAARNKVSWLKGLPARLRNNRARSQGQQDFSHEVYD
AMAGCLACKSCAGQCPIKVNVPDFRSRFLELYHGRYQRPLRDYLIGSLEFTIPYLAHAPG
LYNAVMGSKWVSKLLADKVGMVDSPLISRFNFQATLTRCRVGVASVPALRELTPAQRERS
IVLVQDAFTRYFETPLLSAFIDLAHRLGHRVFLAPYSANGKPLHVQGFLGAFAKAAIRNA
TQLKALADCGVPLVGLDPAMTLVYRQEYQKVPGLDGCPQVLLPQEWLMDVLPEQAPTAPG
TFRLMAHCTEKTNVPASTKQWEQVFARLGLKLVTEATGCCGMSGTYGHEARNQDTSRTIF
EQSWATKLDKEGEPLATGYSCRSQVKRMTERQMRHPLEVVLQYAKR
NT seq 3021 nt   +upstreamnt  +downstreamnt
atgatcgcccagctgccgaccgttgccccgagcgccaactaccccgaattcctcgaagcc
ctgcgcaacagcggcttccgtggccagatcagtgccgactacggcacccgcacggtgctg
gccaccgacaactcgatctaccagcgcttgccacaggcggcggtgttcccgctggacgcc
gatgatgtggcgcgggtcgccacgctgatggccgaggggcgcttccagcaggtcaagctg
accccgcgcggtggtggtaccggcaccaacgggcagtcgctgaccgacggtatcgtcgtc
gacctgtcgcggcacatgaacaaaatcctcgaaatcaacgtcgaggaacgctgggtgcgg
gtgcaggccggtactgtcaaggaccagctcaacgctgcgctcaagccgcacgggctgttc
ttcgcccccgagctgtccacctccaaccgtgccactgtcggcggcatgatcaacaccgac
gccagcggccagggcagctgcacctatggcaagacccgcgaccacgtactggagctgcac
agcgtgctgctcggcggcgagcgcctgcacagcctgccgatcgacgatgccgcgctggag
caggcctgtgctgcgcccggccgggtcggcgaggtgtaccgcatggcgagggagatccag
gaaacccaggccgatctcatcgaagccaccttccccaagctcaaccgttgcctgaccggt
tatgatctggcccacctgcgcgacgagcagggccgcttcaacctcaacagcgtgctgtgc
ggtgccgagggctcgctgggctatgtggtcgaagccaagctcaatgtgctgccgatcccc
aagtacgccgtgctggtcaacgtgcgctacaccagcttcatggatgccctgcgtgacgcc
aacgcgttgatggcgcacaagccgctgtcgatcgagactgtcgactccaaggtgctgatg
ctggcgatgaaggatatcgtctggcacagcgtcgccgaatacttcccggccgaccccgag
cgcccgaccctgggcatcaacctggtggagttctgcggcgacgagccggccgaggtcaat
gccaaggtgcaagcgttcatccagcacctgcagaacgacaccagcgtcgagcgcctgggc
cacaccctggccgagggcgccgaggcggtgacccgcgtctataccatgcgtaaacgttcg
gtgggcctgctgggcaacgtcgagggcgaagtacgcccgcaaccgttcgtggaagacacc
gcggtaccgccggagcaactggccgactacatcgccgacttccgtgcactgctcgatggc
tacggcctggcctatgggatgttcggccacgtcgatgccggcgtgctgcacgtgcgcccg
gcgctggacatgaaggacccggcccaggccgcactggtcaagccgatttccgacgccgtg
gcggcgctgaccaaaagctatggcggcttgctgtggggcgagcacggcaagggcctgcgt
tctgaatacgtgccggagtacttcggcgagctgtacccggcgctgcagcgccttaaaggc
gccttcgacccacacaaccagctcaacccgggcaagatctgcaccccgttgggcagtgcc
gaaggcctgaccccggtcgatggcgtaaccctgcgcggcgatctcgaccgcaccatcgac
gaacgcgtgtggcaggacttccccagcgccgtgcactgcaacggcaacggcgcctgctac
aactacgaccccaacgacgccatgtgcccgtcgtggaaggccacccgcgagcgccagcac
tcgcccaagggccgtgcctcgctgatgcgcgaatggctgcgcctgcagggcgaagccgat
atcgacgtgctggcggcggcacgcaacaaggtgtcgtggctcaagggcctgccggcacgc
ctgcgcaacaaccgtgcgcgcagccagggccagcaagacttctcccatgaggtgtacgac
gccatggccggctgcctggcgtgcaagtcgtgcgccgggcagtgcccgatcaaggtcaac
gtgccggacttccgctcgcgcttcctcgagctgtaccacggccgctaccagcgcccgctg
cgtgactacctgatcggttcgctggagttcaccatcccgtacctggcccacgcgcccggg
ctgtacaacgcggtgatgggctcgaagtgggtgagcaagctgctggccgacaaggtcggc
atggtcgacagcccgctgatcagtcgcttcaacttccaggccaccctgacccgctgccgc
gtcggcgtggccagcgtgccggccctgcgtgaactgaccccggcccagcgcgagcgcagc
atcgtgctggtgcaggatgcctttacccgttacttcgagacaccgctgctgtcggccttc
atcgacctggcgcaccgcctgggccaccgggtgttcctggcgccgtatagtgccaatggc
aagccactgcacgttcagggcttcctcggtgcgttcgccaaggcggcgatccgcaatgcc
acccagctcaaggccctggctgactgcggcgtgccgctggtgggcctggacccggcgatg
accctggtgtatcgccaggagtaccagaaagtgccgggcctggatggctgcccgcaggtg
ctgttgccacaggagtggttgatggacgtgctgccggagcaggcaccgaccgcgccgggc
actttccgcctgatggcgcactgcaccgagaagaccaacgtgccggccagcaccaagcag
tgggagcaggtgtttgcccgccttggcctgaagctggtgaccgaggcgactggctgctgc
ggtatgtccggtacctatgggcacgaggcgcgcaaccaggacacctcacggaccatcttc
gagcagtcgtgggcgaccaagctggacaaggaaggcgagccgctggcgaccggttactcg
tgccgcagccaggtcaagcgcatgaccgagcggcagatgcgccacccgctggaagtggtg
ctgcagtacgccaagcgctga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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