KEGG   Pseudomonas putida HB3267: B479_14125
Entry
B479_14125        CDS       T02389                                 
Name
(GenBank) type VI secretion protein
  KO
K11893  type VI secretion system protein ImpJ
Organism
ppuh  Pseudomonas putida HB3267
Pathway
ppuh02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:ppuh00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    B479_14125
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppuh02044]
    B479_14125
Secretion system [BR:ppuh02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   B479_14125
SSDB
Motif
Pfam: T6SS_VasE
Other DBs
NCBI-ProteinID: AGA73719
Position
3104452..3105795
AA seq 447 aa
MSKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAEATLRTTPFHWGVQVLQVDEDALANGSL
QLKRLKLVFPDGSLYDAPQHDPLPAARDLKDLLKANDLKVHAALKLPEPFGLNYVEDGQE
HKAARRFRKQFDTLPDLNEGELENEITSLRLNVVLLVDGDSLDGYSHCPLARLTRNSMGG
FNLDPHFVHPTLHLGSHETLAGIGKRLLGALQAKSKALSGRRRERADQIAEFGSSDVTLF
WLLNTVNRAHPQLAHLLAHPRLHPERLYLFLADLAGGLLTFTLDTQLSDIPEYDHHDPAA
SLVKLDEMIRVMLDNVVPNQCIVINLNQTKPSYWQGQLHDPRLTEADFYISVHADMPGAS
LLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHAARLPNAIPVRLDNQYFAIEPHGHVYER
MMNAQTICFYAPSAFTNLKLELMAVLK
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagcaagcagagccgggtgatgtggtcggaaggcatgttcctgctgccccagcacttc
cagtaccaggatgagttccaccagcaccagctggccgaggcgaccctgcgcaccacccca
ttccattggggtgtgcaggtactgcaggtggatgaggacgccctggccaacggttcgctg
cagctcaagcgcctcaagctggtgttccccgatggcagcctgtacgacgcgccgcagcat
gacccgctgccggctgcccgcgacctcaaggacctgctcaaggccaacgacctcaaggtc
catgctgccttgaaactgcccgagccattcggcctgaactatgtcgaggacggccaggaa
cacaaggccgcgcggcgtttccgcaagcagttcgataccctgcccgacctcaatgaaggc
gagctggaaaacgaaatcaccagcctgcgcctgaacgtggtgctgctggtggacggtgac
agcctggacggctacagccactgcccgctggccaggctgacccgcaacagcatgggcggt
ttcaatctcgacccgcatttcgtccaccccactctgcatctgggcagccacgagaccctg
gccggcatcggcaagcgcctgctcggcgccctgcaggccaagagcaaggccctgtccggc
cgacgccgcgaacgcgccgaccagatcgccgagttcggctccagcgacgtaaccctgttc
tggctgctgaacaccgtcaaccgcgcccacccgcagctggcccatctgctggcgcacccg
cgcctgcaccccgagcgcctgtacctgttcctcgccgacctggcgggtggcctgctgacg
ttcaccctggacacccagctcagcgacatccccgaatacgaccatcacgacccggccgcg
tcgctggtcaagctcgacgagatgatccgggtgatgctcgacaacgtggtgcccaaccag
tgcatcgtcatcaacctcaaccagaccaagccgtcgtactggcagggccagttgcacgat
ccacgcctgaccgaggccgacttctatatctcggtccatgccgacatgcctggtgccagc
ctgctggagctggtaccgcgggcattcaaggtcggctcgccggaagacatcgaggtggtg
gtcaacagcgcgatgcccggcgtcacgctcaaccatgccgcacggctgcccaacgcaatt
ccggtgcgcctggacaaccagtacttcgccatcgagccgcatggccatgtctacgagcga
atgatgaatgcccagaccatctgcttctacgcgcccagcgcctttaccaacctcaagctt
gaactgatggcggtgctcaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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