KEGG   Pseudomonas putida HB3267: B479_16250
Entry
B479_16250        CDS       T02389                                 
Name
(GenBank) glycine cleavage T protein (aminomethyl transferase)
  KO
K00302  sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
Organism
ppuh  Pseudomonas putida HB3267
Pathway
ppuh00260  Glycine, serine and threonine metabolism
ppuh01100  Metabolic pathways
Module
ppuh_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:ppuh00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    B479_16250
Enzymes [BR:ppuh01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.3  With oxygen as acceptor
    1.5.3.1  sarcosine oxidase (formaldehyde-forming)
     B479_16250
    1.5.3.24  sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
     B479_16250
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 GCV_T_C Pyr_redox_2 FAD_oxidored FAD_binding_2 Pyr_redox_3 NAD_binding_8 HI0933_like GIDA DAO Thi4 Pyr_redox Lycopene_cycl FAD_binding_3 AlaDh_PNT_C
Other DBs
NCBI-ProteinID: AGA74142
Position
3592188..3595091
AA seq 967 aa
MNSHTRLPAPMGLLIDREQPLHFQFDGQACQGFAGDSIASALLGSGRWLLSRSFKYHRPR
GPLSMAGQDANTLVQLPDEPNVLADLEAARDGQVVEGQNFNGSLTHDRDAYLGKFSRFMP
VGFYYRSFYKPKGMWKVWEPLIRKKAGLGVLDLGFRPQYYDKAYLFVDLAVIGAGPAGLR
AALDAANAGAKVLLIEQQPVLGGSLTYARFDIAGTRATSLRQELLAAVEGHPNIQVLLDA
TCNGWFTDNYLPVIQHKRLYKVRASRCLVAAGSFDQPVVFRNNDLPGVMLTSAVQRLMKL
YAVKPGQRAVILTGHDDGYLAALDLQDQGVAVAAVVDMRAAPADAALAAELKRRDIPVHL
GSTVYEALHEAGMRHVSGVDIRPITGQGKVGPHGLRLACDLLCMSAGYMPVYQLPCQAGG
KLAYDVNRDEFAISNLPAGLDIAGSVNGRHALGNVLADATRGAADALAALGLEAPVQPVF
SAEAKVNFPWPIFPHPKGKDFVDFDEDLQVRDIVNATRSGYRDVQLVKRFSTVGMGPSQG
RHSALPTARLVAHATGRSISETGVTTARPPFQAEKLAHVAGRAFDPYRQTPMHRRHLEAG
AKMMPAGIWQRPAYYGKPEDRERCMQEEARHVREKVGLIDVSTLGGLDVRGPDAAELLER
LYTFGFAKLAIGRTRYALMTNEHGVVIDDGVCARLGEQHFYVTATTSGVDRIYQQMLKWN
AQWRLDVDVTNVTAALAAVNLAGPLSRQVLAKVCDDVDLSAEAFPYLGVRQGTVAGIAAR
ILRVGFVGELGYEVHVPARHAERLWDTLMQAGAGLGIRPFGVETQRLLRLEKGHVIISQD
TDGMTHPAEIDMQWAIGRKKPFFVGKRSIEILEAQPLKRKLVGFTLPKGSPQPLEGHLVL
DGADISGNVTSCEYSQTLGQIIGLAYAGAHQATPGMHIPIRVEGGVMVNAKVVPLPFHDP
DNLRQEL
NT seq 2904 nt   +upstreamnt  +downstreamnt
atgaacagccacactcgcctccccgcgcccatgggcctgctgatcgaccgcgagcagccc
ctgcacttccagttcgacggccaggcctgccagggctttgccggtgacagcatcgccagc
gccctgctcggcagtggccgctggctgctgtcgcgctcgttcaagtaccaccgcccgcgc
ggcccgctgagcatggccgggcaggatgccaacaccctggtgcagctgccggacgagccc
aatgtgctggccgacctggaagccgcccgcgatggccaggtagtcgaagggcagaacttc
aacggtagcctgacgcatgatcgcgacgcctacctgggcaagttttcgcgcttcatgccg
gtgggcttctattaccgctccttttacaagcccaagggcatgtggaaggtgtgggagccg
ctgatccgcaagaaggccggcctgggcgtgctcgacctaggcttcaggccgcagtactac
gacaaggcctatctgttcgtcgatctggccgtcatcggcgctggcccggctggcctgcgt
gcggcactggacgcggccaatgccggggccaaggtgttgctgatcgagcaacagccggta
cttggcggctcgctcacctacgcccgcttcgacattgcaggcacccgcgctaccagcctg
cgccaggaactgctggctgccgtcgagggccacccgaacatccaggtgctgctggacgcc
acctgcaacggctggttcaccgacaactacctgccggtgatccagcacaagcgcctgtac
aaggtgcgcgccagccgctgcctggtggcggccggttcgttcgaccagccagttgtgttc
cgcaacaacgacctgccgggggtcatgctgaccagcgccgtgcagcggctgatgaagctg
tacgcggtaaaacccggccagcgcgcggtaatcctcaccggccacgatgacggctacctg
gccgccctcgacctgcaggaccaaggcgtggccgtggccgcggtggtcgacatgcgcgct
gcgccagccgatgccgcactggccgcagaactgaagcgccgcgatatacccgtgcacctg
ggcagcaccgtgtacgaagccctgcacgaagcgggcatgcgccacgtgagtggcgtggat
attcgcccgatcaccggccagggcaaggtcggcccgcatggcctgcgcctggcctgcgac
ctgctgtgcatgtcggcaggctacatgccggtgtaccagttgccgtgccaggctggcggc
aagctggcctacgacgtcaaccgcgacgagttcgccatcagcaacctgccggccgggctg
gacatcgccggctcggtgaacggccgtcacgcactgggcaatgtgctggccgacgccact
cgcggggctgccgatgcgctggcagcgctgggcctggaagcgccggtgcagcccgtgttc
agtgccgaagccaaggtcaacttcccctggccgatcttcccccaccccaagggcaaggat
ttcgtcgacttcgacgaagacctgcaagtgcgcgacatcgtcaacgccacgcgcagcggc
taccgcgatgtgcaactggtcaagcgcttctccacggtcggcatgggcccgtcccagggc
cgccactcggcgctgccaaccgcccgcctggtggcccacgccaccgggcgcagcatcagc
gaaaccggggtgaccaccgcccgtccaccgttccaggcggaaaaactggcccacgtcgcc
ggccgcgccttcgacccgtaccggcaaacgccaatgcaccgccgccacctggaagccggg
gcgaagatgatgccggccggcatctggcagcgccctgcctattatggcaagcccgaggac
cgcgaacgctgcatgcaggaggaagcccgccatgtgcgcgagaaggtcggcctgatcgac
gtttccaccctcggtggcctggatgtgcgcggccccgacgccgccgaactgctggagcgc
ctttacaccttcggcttcgccaagctggccatcggccgcacccgctacgcgctgatgacc
aacgagcatggcgtggtgatcgatgacggcgtgtgcgcccggctgggcgagcagcacttc
tacgtcaccgccaccaccagcggtgtcgaccgcatctaccagcagatgctgaagtggaat
gcgcaatggcgcctggatgtggacgtcaccaacgtcaccgccgccctggccgcggtcaac
ctggccgggccgctgtcacgccaggtgctggccaaggtgtgtgacgatgtggacctgtcg
gccgaggccttcccttatctcggcgtacgccagggcacagtggccggcattgccgcgcgc
atcctgcgggtgggctttgtgggtgaactgggctacgaagtgcacgtgccggcgcgccac
gccgagcgcctgtgggataccttgatgcaggccggcgcggggttgggcattcgcccgttc
ggcgtcgagacccaacgcctgctgcgcctggaaaagggccacgtgatcatcagccaggac
accgacggcatgacccacccggcggagatcgacatgcagtgggccatcggccgcaagaag
ccattcttcgtcggcaaacgctcgatcgagatcctcgaagcgcagccgctcaagcgcaaa
ctggtcggcttcaccctgcccaagggcagcccgcagccgctggaggggcatctggtgctg
gacggggcggacatcagcggcaacgtcacatcctgcgaatactcgcaaaccctggggcag
atcatcggcctggcttacgccggtgcccatcaggccacgcctggcatgcacatcccgatc
cgcgtggagggcggtgtgatggtcaatgccaaggtggtgccactgccgtttcacgatccc
gacaacctgcgccaggagctctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (38)   

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