KEGG   Pseudomonas putida NBRC 14164: PP4_20750
Entry
PP4_20750         CDS       T02707                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
ppun  Pseudomonas putida NBRC 14164
Pathway
ppun00550  Peptidoglycan biosynthesis
ppun01100  Metabolic pathways
ppun01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:ppun00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PP4_20750 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    PP4_20750 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppun01011]
    PP4_20750 (mrdA)
Enzymes [BR:ppun01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     PP4_20750 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:ppun01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   PP4_20750 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: BAN53928
Position
complement(2352011..2353906)
AA seq 631 aa
MPQPIPLKDHEKEKHLVNRRLLACAILVFSLVAVLVGRLYVLQVLQHDQQTAVSENNRVH
VLPIAPERGLIYDRNGVVLADNKPSFDLTMTRERAGGDSAKVLDTLTQVLGLTEDDRKQF
DKDLRRGRKPFEPVTLMVGLSEEQIALVAVNQFRLPGLEVEPQFIREYPLAGHFAHSVGY
VGRINEKEAKVLDSTEYRGTQSIGKTGIEHFYESQLHGHVGYEEVETNAQGRVMRVLNHK
APTPGQDIVLTLDAHLQVAAEKALGDRRGSVVVLDPANGDVLAMVSNPSFDPNLFVKGIS
FKQYAELRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVITPGSRVFDPGYYELPN
YDHKYRNWNRSGDGWVDMYTAIMRSNDTYFYDLAHKLGIDRLHDYMAEFGLGQKVSLDMF
EEASGLMPSAQWKRATRRQAWFPGETLILGIGQGYMQVTPLQLAQATSLLASKGVWHRPH
LAMTVGGDAPVDPNPMPNIVLHDKHAWDQVSQGMQMVMHDPRGIARAAAAGAQYRIAGKS
GTAQVVAIKQGERYNRNKTLERHRDNALFVGFAPADHPSVVVAVMIENGEAGGRVAGPVV
REVMDAYLLDEQGHLKPEYAGGASGRNVPHI
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgccacaacccatccccctcaaggaccacgaaaaggaaaagcacctggtcaatcgccgg
ctcctggcctgcgccatcctggtcttcagcctggtcgccgtgctggtggggcggctgtat
gtcttgcaggtgctgcagcacgaccagcagaccgccgtgtcggaaaacaaccgtgtgcac
gtgctgcccatcgcccccgaacgcgggctgatctacgaccgcaacggcgtggtgctggcc
gacaacaaacccagcttcgacctgaccatgacccgtgagcgggccggcggcgactcggcc
aaggtgctcgacaccctcacccaggtgctaggcctgaccgaagacgaccgtaagcagttc
gacaaagacctgcgccgtggccgcaagccgttcgaaccggtgaccctgatggtgggcctg
agcgaagagcagatcgctctggtggcggtgaaccagttccgcctgccgggcctggaggtg
gaaccgcagttcatccgcgaatacccgctggctgggcatttcgcccactcggtaggctac
gtgggtcgcatcaacgagaaagaagccaaggtcctggacagcaccgagtaccgtggcacc
cagtcaatcggcaagaccggtatcgagcacttctacgaaagccagctgcatggccacgtg
ggctacgaggaagtcgagaccaacgcccagggccgggtgatgcgcgtgctcaaccacaag
gccccgaccccgggccaggacattgtcctgaccctggacgcccacttgcaggtagccgca
gaaaaggcgctgggcgaccggcgtggctcggtggtggtactggacccggcgaacggcgat
gtgctggcaatggtcagcaaccccagcttcgaccccaacctgttcgtcaagggcatcagc
ttcaagcagtacgccgaactgcgcgattccatcgaccgccccctgttcaaccgcgtgctg
cgcggcctgtatgccccgggctcgacggtgaagccggaagtggccatcgccggcctcgac
agcggcgtgatcaccccgggcagccgggtgttcgacccgggctactacgagctgcccaac
tacgaccacaagtaccgcaactggaaccgcagcggcgacggctgggtggacatgtacacc
gccatcatgcggtccaacgacacctacttctacgacctggcgcacaagctgggcatcgac
cgcctgcatgactacatggccgaattcggcctgggccagaaggtgtcgctggacatgttc
gaagaggcctccggactgatgccgtcggcccagtggaagcgcgccacccggcgccaggca
tggttcccgggcgaaacccttatcctgggtatcggccagggctacatgcaggtcaccccg
ctgcagctggcccaggccaccagcctgctggcgagcaagggcgtgtggcatcgcccgcac
ttggccatgaccgtgggtggcgatgcgccggtggaccccaacccgatgcccaacatcgtg
ctgcacgacaagcatgcctgggatcaggtcagccagggcatgcagatggtcatgcacgac
ccgcgcggtattgcccgcgccgctgcggcaggcgcgcagtaccggatcgccggcaagagt
ggtaccgcgcaggtggtggcgatcaagcagggtgagcgttacaaccgcaacaagaccctg
gagcgccaccgcgacaacgccctgtttgtcggctttgcacctgccgaccacccgagtgtg
gtggtggcggtgatgatcgagaacggtgaggctgggggccgggtggcggggccggtggtg
cgcgaggtgatggatgcttacctgctggatgagcaagggcacttgaagccggagtatgca
ggcggtgcaagtggccgtaacgtgccacacatctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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