KEGG   Pseudomonas putida H8234: L483_01640
Entry
L483_01640        CDS       T02706                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pput  Pseudomonas putida H8234
Pathway
pput00260  Glycine, serine and threonine metabolism
pput00460  Cyanoamino acid metabolism
pput00630  Glyoxylate and dicarboxylate metabolism
pput00670  One carbon pool by folate
pput00680  Methane metabolism
pput01100  Metabolic pathways
pput01110  Biosynthesis of secondary metabolites
pput01120  Microbial metabolism in diverse environments
pput01200  Carbon metabolism
pput01230  Biosynthesis of amino acids
pput01240  Biosynthesis of cofactors
Module
pput_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pput00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    L483_01640 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    L483_01640 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    L483_01640 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    L483_01640 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    L483_01640 (glyA)
Enzymes [BR:pput01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     L483_01640 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Cys_Met_Meta_PP DegT_DnrJ_EryC1 Beta_elim_lyase
Other DBs
NCBI-ProteinID: AGN77437
Position
346676..347929
AA seq 417 aa
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANGAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGINTDTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKAYQQQVIENAQAMAQ
VFIDRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCVALAGWICDILDNLGDADVEADVAKNVAALCADFPVYR
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttcagcaagcaagaccagatccagggttacgacgacgcactgctggcggcgatgaat
gccgaggaacagcgccaggaagatcacatcgagctgatcgcctcggagaactacaccagc
aagcgcgtcatgcaggcccaaggcagcggcctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggctgcgagcacgtggacaaagtagaagccctggccatcgag
cgcgccaagcagctgttcggtgccgactacgccaacgtacagccgcactccggctcgtcg
gccaatggcgccgtctacctggccctgctgcaggccggtgacaccatcctcggcatgagc
ctggcccacggtggccatctgacccacggcgccaaagtgtcgtcctcgggcaagctctat
aacgccgtgcagtacggcatcaacaccgacaccggcctgatcgactacgacgaagtcgag
cgcctcgcggtcgagcacaagccgaaaatgatcgttgccggtttctcggcctactccaag
accctcgacttcccacgcttccgcgccattgccgacaaggtgggtgcgctgctgttcgtc
gacatggcccacgtagccggcctggttgccgctggcctgtacccgaacccgatcccgttc
gccgatgtggttaccaccaccacccacaagaccctgcgcggccctcgtggcggtctgatc
ctggccaagtcgaacgaagagatcgagaagaagctgaacgccgctgtattcccgggcgcc
caaggcggcccgctgatgcacgtgattgccgccaaggccgtgtgcttcaaggaagcgctg
gagcctggcttcaaggcctaccagcaacaagtgatcgaaaacgcccaggccatggcccag
gtgttcatcgaccgcggctacgacgtggtgtccggtggcaccgacaaccacctgttcctg
gtcagcctgatccgccagggcctcactggcaaagatgccgacgccgccctgggccgcgcg
cacatcaccgtcaacaagaacgccgtgccgaacgacccacagtcgccgttcgtcacctcg
ggcctgcgcatcggtaccccggccgtcaccacccgcggcttcaaggttgcgcagtgcgtg
gccctggccggctggatctgcgacatcctcgacaacctcggtgacgcagacgtcgaagcc
gatgtggcgaagaacgtcgcggcgctgtgcgcagacttccctgtttaccgctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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