KEGG   Pseudomonas sp. UW4: PputUW4_02879
Entry
PputUW4_02879     CDS       T02357                                 
Symbol
rnhA
Name
(GenBank) ribonuclease H
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
ppuu  Pseudomonas sp. UW4
Pathway
ppuu03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ppuu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PputUW4_02879 (rnhA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppuu03032]
    PputUW4_02879 (rnhA)
Enzymes [BR:ppuu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     PputUW4_02879 (rnhA)
DNA replication proteins [BR:ppuu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    PputUW4_02879 (rnhA)
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     PputUW4_02879 (rnhA)
   Elongation factors (archaeal)
     PputUW4_02879 (rnhA)
SSDB
Motif
Pfam: RNase_H DUF3679
Other DBs
NCBI-ProteinID: AFY20074
UniProt: K9NJY1
Position
complement(3383684..3384136)
AA seq 150 aa
MSDSVELFTDGACKGNPGPGGWGALLVCKGVEKELWGGEANTTNNRMELMGAIRGLEELK
RPCEVLLVTDSQYVMKGINEWMDNWKKRGWKTAAKEPVKNADLWKLLDEQVNRHKVTWKW
VRGHIGHHGNERADQLANRGVDEVRGYKQD
NT seq 453 nt   +upstreamnt  +downstreamnt
atgagcgatagcgtagaactgttcaccgacggcgcctgcaagggcaaccccggccctggc
ggctggggcgcactgctggtgtgcaagggcgttgaaaaggaactctggggcggcgaagcc
aataccaccaacaaccgcatggagctgatgggtgcgatccgtggcctggaagagctcaag
cgtccctgtgaggtgctgctggtgaccgactcccagtacgtgatgaagggcatcaacgag
tggatggacaactggaagaagcgcggctggaaaaccgcggcgaaggagccggtgaaaaac
gctgatctgtggaagttgctcgacgagcaggtcaaccgccacaaggtcacctggaaatgg
gtgcgcgggcacattggccatcacggcaacgaacgcgccgaccagttggccaaccgtggc
gtcgacgaagtgcgcgggtacaagcaggactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system