KEGG   Pseudomonas sp. UW4: PputUW4_04106
Entry
PputUW4_04106     CDS       T02357                                 
Symbol
rumA
Name
(GenBank) 23S rRNA 5-methyluridine methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
ppuu  Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:ppuu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppuu03009]
    PputUW4_04106 (rumA)
Enzymes [BR:ppuu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     PputUW4_04106 (rumA)
Ribosome biogenesis [BR:ppuu03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PputUW4_04106 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_25 Methyltransf_31 TRAM MTS Cons_hypoth95 RrnaAD Methyltransf_23 Methyltransf_11 Methyltr_RsmB-F Met_10 PCMT Methyltransf_15 PrmA Methyltransf_12 Methyltransf_4
Other DBs
NCBI-ProteinID: AFY21298
UniProt: K9NQ45
Position
complement(4720691..4722043)
AA seq 450 aa
MAKHERGLRFQPAGGSKAPQIPTGKKQRLTIERLANDGRGIAFFEGRTWFVIGALAGEEI
EARVLGAHGKVVEARTERVFKASESRRPAPCAHAGRCGGCSVQHLPHNEQLALKQRMLAE
QLSKVAGVEPEEWAPPLSGAEFAYRRRARVAVRWDMKAKKLEVGFRAAGSQDIIGIDDCP
VLVQPLQPIMTRLPEMLRRLSKPQALGHVELFSGSTLAVLLRHMAPLSEGDMTILKDFCA
FHEAQLWLHGDGEPQPVEADQSLGYRLEQWDLELAYRPGDFIQVNAGVNEAMVAQALDWL
KPTADERVLDLFCGLGNFALPLAKAAREVVAVEGVQVMVDRAAANAASNNLHNAKFFQAD
LSQPLTGAEWAAEGFCAVLLDPPRDGAFEVVRKLKTLGAERLVYVSCNPATLARDTVELI
KQGYRLKRAGILDMFPQTAHVEAMALFEAS
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggccaagcatgaaagaggcctgcgcttccagcccgccggtggcagcaaggccccgcaa
atcccgaccggtaaaaagcagcgcctgactatcgagcgcctggccaatgacggtcgcggc
atcgcgtttttcgaaggtcgcacctggttcgtcatcggtgcattggccggtgaggagatt
gaagcgcgtgtgctcggcgcccacggcaaagtggtcgaggcgcgcaccgagcgggtgttc
aaggccagtgaatcgcgccgcccggcaccgtgcgcccatgccggccgttgcggcggttgc
agcgtgcagcatttgcctcataacgaacaactcgccctgaaacagcgcatgctcgccgag
cagttgtcgaaggtcgcaggcgtcgaacccgaagagtgggcgccacctttgagcggtgcg
gaattcgcctaccggcgtcgcgcccgcgtggcggtgcgctgggacatgaaggcgaaaaaa
ctcgaagtcggtttccgtgccgccggcagccaggacatcatcggcatcgatgattgcccg
gtgctggtacagcccttgcagccgatcatgacccgcttgccggaaatgttgcggcgcttg
agcaaacctcaggcactggggcacgtggagttgttcagcggctcgacgctggcggttttg
ctgcggcacatggcaccgttgtctgaaggtgacatgaccatcctcaaggatttctgcgcc
ttccatgaggcccagttgtggctgcatggcgacggtgaaccgcaaccggtcgaggctgac
cagtcgttgggctatcgtcttgaacagtgggatctggagctggcgtatcggccgggagac
ttcatccaggtcaacgctggcgtcaacgaagcgatggtcgcccaggcgctggactggttg
aagccgacggcggatgagcgcgtactcgatctgttctgcggcctgggcaactttgccttg
ccgctggccaaggctgctcgcgaagtggtggcagtggaaggtgtgcaggtgatggtcgac
cgggcggcggcgaatgcggctagcaacaatctgcataacgcgaagttttttcaggccgat
ttatcccagcctttgacgggcgcagaatgggccgccgaaggcttttgtgcggtactcttg
gacccaccgcgtgacggtgctttcgaggttgtgcgcaagctcaagaccctgggcgccgag
cggttggtgtatgtgtcatgcaacccggcaacgctggcgcgcgacacggtcgaattgatc
aagcagggctaccggttaaaacgtgccgggattctcgatatgtttcctcaaacggcacat
gtcgaggccatggcgttatttgaagcgagctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (25)   

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