KEGG   Pseudomonas sp. UW4: PputUW4_04505
Entry
PputUW4_04505     CDS       T02357                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
ppuu  Pseudomonas sp. UW4
Pathway
ppuu00470  D-Amino acid metabolism
ppuu00550  Peptidoglycan biosynthesis
ppuu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ppuu00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PputUW4_04505 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PputUW4_04505 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppuu01011]
    PputUW4_04505 (murD)
Enzymes [BR:ppuu01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     PputUW4_04505 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:ppuu01011]
 Precursor biosynthesis
  Amino acid ligase
   PputUW4_04505 (murD)
SSDB
Motif
Pfam: MurD-like_N Mur_ligase_M
Other DBs
NCBI-ProteinID: AFY21697
UniProt: K9NQ28
Position
complement(5172579..5173925)
AA seq 448 aa
MSLIASDHFRIVVGLGKSGMSLVRFLANRGVAFAVADTRENPPELATLKRDYPHVEVRCG
ELDVEFLCRADELYVSPGLALATPALQAAAARGVKLSGDIELFARNAKAPIVAISGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLRDDVELYVMELSSFQLETTDQLNAEVAT
VLNVSEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDALSRPLMGEGQPCWTFGLSKPD
FKAFGIREEDGEKYLAFEFQNLMPVRELKIRGAHNQSNALAALALGHAVGLPFDAMLSSL
RTFAGLEHRCQWVRDLDGVGYYNDSKATNVGAALAAIEGLGADIDGKVVLIAGGDGKGAE
FKDLRDPVAANCRAVVLMGRDSDKIGEAIGDAVPLIRAASLVEAVERCRAAAQPGDVVLL
SPACASFDMFKNYEDRGHQFVQAVEDLA
NT seq 1347 nt   +upstreamnt  +downstreamnt
gtgtctctgatcgcttctgaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgaaccggggcgtggcgtttgcagtggccgatacgcgggaa
aatccaccggaactggccacgctcaagcgtgactatccgcacgtggaagtgcgttgtggc
gagctggacgtcgaattcctgtgccgcgccgacgagctctacgtgagccccggcctggcg
ctggcgaccccggccctgcaggccgccgccgcccgtggcgtgaaattgtccggcgacatc
gagctgttcgcgcgtaacgcgaaggcgccgatcgtggccatcagcggttccaacgcgaaa
agcaccgtcaccaccctggtcggcgaaatggcagcggcggcgggcaagcgcgttgccgtc
ggtggcaacctcggtacaccggccctggatctgctgcgcgacgacgtcgagctgtacgtg
atggagttgtcgagtttccagctggagaccaccgatcaactcaacgccgaagtggcgacc
gtgctcaatgtcagcgaagaccacatggaccgttacagcggtctgccggcctatcacctg
gccaagcaccggatcttccgtggtgcccggcagttcgtggtcaatcgccaggatgccctg
agccgtccgttgatgggtgagggccaaccgtgctggaccttcggcctgagcaaaccggac
ttcaaagccttcggcatccgtgaagaagacggtgagaagtacctggccttcgaattccag
aacctgatgccggtgcgtgaattgaagattcgcggtgcccacaaccagtccaacgccctg
gcggccctggcccttggccatgctgtcggtctgccgttcgatgccatgctgtcgagcctg
cgcaccttcgccggtctcgagcatcgctgccaatgggtccgcgaccttgatggcgtgggt
tactacaacgactccaaggccaccaacgtcggcgccgcgctggccgccatcgaaggcctg
ggcgcggacatcgacggcaaggtcgtgctgatcgccggcggtgacggcaagggtgccgag
ttcaaggacctgcgcgatccggtggcggccaactgccgcgccgtagtgttgatgggccgc
gactccgacaagatcggcgaagccattggtgacgccgttccgctgatccgcgccgcttcc
ctggtcgaagccgtcgaacgatgccgcgccgccgcccagccgggcgacgtggtgctgctg
tcgccagcctgcgccagcttcgacatgttcaagaactacgaagaccgtggccaccagttc
gtccaagccgtggaggatctggcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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