KEGG   Pseudomonas putida W619: PputW619_1216
Entry
PputW619_1216     CDS       T00675                                 
Name
(GenBank) RNA methyltransferase, TrmA family
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
ppw  Pseudomonas putida W619
Brite
KEGG Orthology (KO) [BR:ppw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppw03009]
    PputW619_1216
Enzymes [BR:ppw01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     PputW619_1216
Ribosome biogenesis [BR:ppw03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PputW619_1216
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_25 Methyltransf_31 Cons_hypoth95 MTS Methyltransf_11 Methyltr_RsmB-F Methyltransf_23 Met_10 RrnaAD Methyltransf_15 PCMT Methyltransf_4 Ubie_methyltran PrmA TPMT DREV
Other DBs
NCBI-ProteinID: ACA71721
UniProt: B1J1L6
Position
1347523..1348881
AA seq 452 aa
MSRKKSNSGLRFQPAGGNRTPQVPVGKKQRLEIERLAGDGRGIAFHDGRTWFVSGALAGE
AVEARVLNARGKVVEARLERVLQASPERRQAPCRHYERCGGCNLQHLPHEAQLALKQRTL
AEQLQRVAGVQPQEWAAPLSGPEFGYRRRARVAVRWDVKARQLEVGFRAEASQDIVAIDD
CAVLVQPLQSILRHLPTVLRSLGKPQAIGHVELFSGTAEALLVRHVAPLPADDLARLQAF
CNEAKAQLWLQGEGEPAPVDAGTKLGFTLQPWQLELAWRPGDFVQVNAQVNTAMIEQALA
WLAPQADERVLDLFCGLGNFALPLARQAREVVAVEGVQAMVDRAAANARNNNVHNARFFQ
ADLSQPLAGAGWAAEGFSAVLLDPPRDGAFEVVQGIARLKAKRLVYVSCNPATLARDAQV
LVGQGYRLKRAGILDMFPQTAHVEAMALFEAG
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtccagaaagaaaagtaacagcggcctgcgctttcagccggccggcggtaaccgcacg
ccccaggtccccgtgggcaaaaagcagcgcctggagatcgagcgcctggccggtgacggc
cgcggcatcgctttccacgacgggcgcacctggttcgtcagcggcgccctggccggtgag
gcggtggaggcgcgggtgctcaatgcccgtggcaaggtagtcgaggctcgcctggagcgt
gtgctgcaggccagccccgagcgccgccaggcgccgtgccgccattacgaacgttgtggt
ggttgcaacttgcagcacctgccgcatgaggcgcagctggcgctcaagcaacgtaccctg
gccgaacagctgcaacgggttgccggtgtgcaaccgcaagaatgggcggcgccattgagc
gggccggaattcggctatcggcgtcgggcacgtgtagccgtgcgctgggatgtgaaagcg
cgtcagctggaggtagggttccgtgccgaggccagccaggacatcgtcgccatcgacgac
tgcgccgtgctggtacagcctttgcagtcgattctgcggcatctgcctaccgtgctgcgt
tcgttgggcaagccccaggccatcggccacgtcgagctgttcagcggcacggccgaagcg
ctactggtacgccacgtggcaccgttgccggccgatgacctggcgcgtctgcaggcattc
tgcaacgaggccaaggcgcagctgtggctgcagggtgaaggtgaaccggcgccggtggat
gctggcacgaagctgggcttcaccttgcagccttggcagttggagctggcctggcgcccg
ggcgatttcgttcaggtcaacgcccaggtcaacaccgcaatgatcgagcaggctctggcc
tggctcgctccgcaggccgatgagcgagtgctcgacctgttctgtggcctgggcaatttc
gccctgccgctggcccgccaagcgcgggaagtggtggcggtcgaaggagtgcaggcgatg
gttgatcgtgctgcggccaatgccagaaacaacaatgtgcataacgcacggttttttcag
gccgatttatcgcagcctttggcaggcgccggatgggccgccgagggcttttctgcggta
ctcttggatccaccgcgcgacggtgctttcgaggtggtgcaaggcatcgcacgcctcaag
gccaagcggctggtttatgtatcatgcaacccggccacgctggcgcgagacgcccaggta
ctggttggccaagggtaccggttaaaaagggccgggattctcgacatgtttcctcagacg
gcgcatgtcgaggccatggcgttattcgaagcgggctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (27)   

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