KEGG   Pseudomonas putida DOT-T1E: T1E_1833
Entry
T1E_1833          CDS       T02181                                 
Symbol
nth
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ppx  Pseudomonas putida DOT-T1E
Pathway
ppx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    T1E_1833 (nth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppx03400]
    T1E_1833 (nth)
Enzymes [BR:ppx01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     T1E_1833 (nth)
DNA repair and recombination proteins [BR:ppx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     T1E_1833 (nth)
 Prokaryotic type
     T1E_1833 (nth)
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5 HHH_8
Other DBs
NCBI-ProteinID: AFO47681
UniProt: I7C3K7
Position
complement(2006040..2006678)
AA seq 212 aa
MNAAKRLEIFRRLHEDNPDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVANT
PEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRLLIERHDSQVPQTREALEALPGVGRK
TANVVLNTAFRQPAMAVDTHIFRVSNRTGIAPGKTVLEVEKKLVKFVPKDYLLDAHHWLI
LHGRYVCQARKPRCGSCRIEDLCEYKHKTSDD
NT seq 639 nt   +upstreamnt  +downstreamnt
atgaatgccgccaaacgcctggagatttttcgcaggctgcacgaagacaaccccgacccc
aagaccgaactggcctacacgaccccgtttgaactgctggtcgccgtgacactgtccgcg
caatccaccgacgtcggcgtcaacaaggccactgcccgcctgttccccgtcgccaacacc
cccgaggccatctatgccctgggcgttgaaggcctcagcgaatacatcaagaccatcggg
ctttacaacagcaaggccaagaatgtcatagaagcgtgccggctgctgatcgagcgccac
gacagccaggtaccgcaaacccgcgaagcgttggaggcgctacccggcgtcggccgcaaa
accgccaatgtggtgcttaacacggcgtttcgccaaccggccatggccgtggatactcat
attttccgggtgagtaaccgcacgggcatcgcgccaggcaaaacggtgctggaagtggaa
aagaaactggtcaagtttgtacccaaggactacctgctcgacgcccaccactggctgatc
ctgcacgggcgctacgtatgccaggcgcgcaagccaaggtgcggcagctgcaggatcgaa
gatttgtgcgagtacaagcacaaaacctccgacgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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