KEGG   Paenibacillus polymyxa E681: PPE_00143
Entry
PPE_00143         CDS       T01319                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ppy  Paenibacillus polymyxa E681
Pathway
ppy03030  DNA replication
ppy03430  Mismatch repair
ppy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PPE_00143
   03430 Mismatch repair
    PPE_00143
   03440 Homologous recombination
    PPE_00143
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppy03032]
    PPE_00143
   03400 DNA repair and recombination proteins [BR:ppy03400]
    PPE_00143
Enzymes [BR:ppy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PPE_00143
DNA replication proteins [BR:ppy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PPE_00143
DNA repair and recombination proteins [BR:ppy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PPE_00143
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA AAA_30 RuvB_N DnaX_C TIP49 AAA_5 AAA_16 AAA_19 AAA_22 AAA_7 AAA_14 AAA_2 AAA_assoc_2 Rad17 nSTAND3 PIF1 End3 AAA_18 AAA_28 Mg_chelatase TsaE GNAT_C AAA_24 RNA_helicase DUF815 AAA_6 VapE-like_dom
Other DBs
NCBI-ProteinID: ADM68041
UniProt: E0RAC8
Position
177016..178767
AA seq 583 aa
MEHIALYRAWRPQAFKDMVGQQHIIQTLQNAIRENRTSHAYLFSGPRGTGKTSAAKILAK
AINCEHGPAPEPCNECEACKRITAGAVMDVQEIDAASNRGVEEIRDLRDKVKYAPTEVRH
KVYIIDEVHMLTTEAFNALLKTLEEPPPHVMFILATTEPHRIPATIISRCQRFDFRRVSL
EEQTERLDLICRQENIQADSDALQYIARLSDGGMRDAVSVLDQISSFTDGRVTYQQVLDM
TGGIASEQFGKLALALLKEDVGTVLQMIENFMQEGKSADKCMENLLYYFRDLLMIKMVPQ
ATKMTERVLDPERFKEVADAFTKEQLFAMIDTLNRYQSEMKYAVQPQTLFEVALLKLCSI
PGEAGTVAQPTAQRSGAAADQEDVVMLKRQLAELEKKLERALQGGLGVGAGQEASSGGRQ
ASGGRVPAPRISAPAKLPSQLDRYIAEKSSEAFAAAGRKWSQILQGVKEAKVTVHAWFMD
GEPVSVLEDSVLVAFKNNIHRETTEKPANKQVIEKVLHEQLGHPYRLVTMMQKDWNAAIE
GVSDQPAEELQLEPEHDAPGKSKEPWIDEAIQLFGEDLVVIKD
NT seq 1752 nt   +upstreamnt  +downstreamnt
ttggaacatatagcgttgtaccgtgcttggcggccgcaggctttcaaggacatggtagga
caacagcatattatccagacattgcagaatgccatccgcgaaaatcgcacgtcccatgcc
tatctgttcagcggtccacgaggaacaggtaagacgagtgcggccaaaattttggccaag
gcaatcaattgtgagcatggacctgcgccggaaccttgcaacgagtgcgaagcctgtaaa
cggatcacggccggagcggtcatggatgtacaggagattgatgcagcctctaatcggggc
gttgaagagattcgtgatttgcgcgataaagtcaaatatgcgcccacagaagtgcggcac
aaggtttatatcattgatgaagtgcacatgctgacgacggaagcgttcaatgcgctgctt
aagacgctggaagagccgccaccacacgtgatgttcatattggctacgactgaaccacat
cggattccggctacaattatatcacgttgccagcggtttgatttccggcgggtatcgctg
gaagaacagacagagcggcttgacctgatatgtcgacaggagaacatacaggctgattca
gatgcactgcagtacattgcgcgtctttcagatggcgggatgcgagatgcggttagcgtt
ttagatcagatatcctcgtttacagatggtcgggttacttatcagcaggtgctggatatg
acggggggtattgcgtccgagcaattcggtaagcttgccttggcattgctgaaagaagat
gtgggcacggtgctccaaatgatcgagaactttatgcaggaaggtaaaagtgcggataag
tgcatggagaatcttctgtactatttccgagatctgctaatgatcaagatggtgcctcag
gcgaccaaaatgacggagcgagtgctggatccagagcgatttaaggaagtggcagatgct
tttaccaaggagcaactctttgcgatgattgacactcttaatcggtatcagagcgagatg
aaatatgccgtacagccacaaactttgtttgaggtagctctattgaagctgtgcagtatt
ccgggggaagcaggaactgttgctcagccgaccgcacaacgctctggcgctgcagctgat
caggaagatgtggtaatgttgaagcgtcagcttgctgagctggaaaagaaactggagcgc
gcgctgcaaggtggattgggcgttggagcaggacaggaagcgtcgtcgggtggtcgtcag
gcttccgggggccgtgtccctgctccgcggatttcagcgccagccaaacttccttctcag
ttggatcgctatatcgctgagaagtcgagcgaagcattcgcagcagcaggacgtaagtgg
agccagattttacaaggggtaaaagaggcgaaagttacggttcatgcttggtttatggat
ggtgagccagtttctgtgttagaggacagtgtgctggttgcatttaagaacaatattcat
cgtgaaactaccgaaaagcctgccaataagcaggtcatcgagaaggtattgcatgagcag
ttgggtcatccttatcgtttagtaacgatgatgcaaaaggattggaatgctgcgattgaa
ggagtttccgaccagcctgccgaagaattgcagctggagccggagcatgatgcgccggga
aagtccaaagagccctggattgatgaagctattcaacttttcggggaagacctagtagtc
attaaagattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (29)   
   Pfam (29)   
All databases (42)   

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