KEGG   Pieris rapae (cabbage white): 111000764
Entry
111000764         CDS       T05162                                 
Name
(RefSeq) probable small nuclear ribonucleoprotein Sm D1
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111000764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:prap03041]
    111000764
   03032 DNA replication proteins [BR:prap03032]
    111000764
Spliceosome [BR:prap03041]
 Complex A
  U1 snRNP components
   Sm proteins
    111000764
  U2 snRNP components
    111000764
 Complex B
  U1 snRNP components
    111000764
  U4/U6.U5 tri-snRNP components
    111000764
 Complex C
  U2 snRNP components
    111000764
DNA replication proteins [BR:prap03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     111000764
SSDB
Motif
Pfam: LSM SM-ATX Gemin7 IDH
Other DBs
NCBI-GeneID: 111000764
NCBI-ProteinID: XP_022126019
Position
24:complement(4787078..4787690)
AA seq 125 aa
MKLVRFLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNKEELQLETLSI
RGNNIRYYLLPDSLPLETLLIDDTPKGRGKREGFQRGGTRGGRGRGRGGRGGPRGGRGGR
GRGRR
NT seq 378 nt   +upstreamnt  +downstreamnt
atgaagctagtgcgttttttaatgaaattgagtcacgagacggttacaattgaactcaaa
aatggaagcgtagttcatggaacgatcaccggcgtcgatgttgcaatgaacacacatttg
aaagctgtaaaagtaacgctgaagaacaaagaggagcttcaattggagacattgagtata
cgtgggaacaacattcggtattacttacttcctgacagtttacctttggaaactctacta
attgatgacacacctaagggcagagggaaacgcgaaggtttccagcgaggtggtactaga
ggcggtcgtggaagaggaagaggtggtcgtggcggtcccagaggaggtcgcgggggccgc
ggccgtggacgtcgatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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