KEGG   Pieris rapae (cabbage white): 111002589
Entry
111002589         CDS       T05162                                 
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
  KO
K15323  tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16]
Organism
prap  Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:prap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:prap03016]
    111002589
Enzymes [BR:prap01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     111002589
Transfer RNA biogenesis [BR:prap03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    111002589
SSDB
Motif
Pfam: tRNA_int_endo
Other DBs
NCBI-GeneID: 111002589
NCBI-ProteinID: XP_022128435
Position
4:complement(6292293..6293876)
AA seq 282 aa
MIPLYVTNGSAYVWNSEDWYTLRVKYRICGALIGSLPSFPRQNDFQGLPMSLMTEEATLL
VNEGICELISITDLNVKPSNDLKLQIDDCENRITLEQKEALKKRKIEQLSQKIDIIVAGK
KQKLLSKGISDVNLDKNILLQEEINKIPNIAPGHLLVHLPTQHHLKCNEEKNISTDVLDP
SLRTEKGKIKYAVFHDLWKKGYYLTNGSKFGSDFLVYQGDPVKFHATYMVKCTSVATKFR
PANIVAFGRLSVAVNKLAVLAYFNNTGTIEYQTLQWHDSVVR
NT seq 849 nt   +upstreamnt  +downstreamnt
atgattcctctttatgttaccaatggttctgcatatgtttggaattcagaagattggtac
acattacgtgtaaaatatcgaatttgtggtgctttgattggttctcttccatcctttcct
aggcaaaatgactttcaagggctacctatgtctcttatgacagaagaggcaacactatta
gtcaatgaaggcatatgtgaattgattagtattacagatttaaatgtgaagccctctaat
gatttaaagctacaaattgatgactgcgaaaacagaataacactggaacaaaaggaagct
ttaaaaaaaaggaaaattgagcagttatcacaaaaaattgatatcattgtagctggtaaa
aaacaaaaactattgtctaaaggaatctcagatgttaatctagataaaaatattttatta
caagaagaaattaacaaaattcctaatattgcaccagggcacttacttgtacatttacca
actcaacatcatttaaaatgtaatgaggaaaaaaatatatctactgatgtcttggatcct
agcctcagaactgaaaaaggtaaaataaaatatgcagtatttcatgacttgtggaaaaaa
ggatactatttaacaaatggatcaaaatttggatcagattttttggtttatcaaggtgat
ccagtaaaattccatgctacatacatggtgaaatgtaccagtgttgcaacaaaatttcgt
ccagctaatatagtagcatttggtagattgtctgttgctgtaaataaacttgcagtctta
gcctattttaataatactggtacaatagaataccaaactttacaatggcatgacagtgta
gtgagataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

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