KEGG   Poecilia reticulata (guppy): 103461906
Entry
103461906         CDS       T05149                                 
Name
(RefSeq) tripartite motif-containing protein 54-like
  KO
K10654  tripartite motif-containing protein 55
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pret00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103461906
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pret04121]
    103461906
Ubiquitin system [BR:pret04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    103461906
SSDB
Motif
Pfam: zf-RING_UBOX zf-B_box zf-C3HC4 zf-C3HC4_2 zf-RING_6 zf-C3HC4_4 zf-RING_5 zf-C3HC4_3 zf-RING_2 Sina_RING UvrD_C Exonuc_VII_L APP_E2 FAM184
Other DBs
NCBI-GeneID: 103461906
NCBI-ProteinID: XP_008402517
UniProt: A0A3P9Q6E9
Position
LG2:complement(43787362..43799345)
AA seq 505 aa
MSLSADLSCLQSSQGAEREAALASLEKQLMCPICADIFSKPVVILPCQHNLCRKCANELY
QPSLFHARTTMLVNSGRFRCPTCRHDVVLDRHGVYGLQRNLLVENIIDIYKQELNQIPSP
PPLPPPLPPAEATCSDHEGEKLNIYCLTCQLPTCSFCKVFGAHQNCRVAPLTDVHQQKKD
ELSEGISSLGEFRDRVQALVSDTEDTCRAVEESFKTQKQNVCDKFSSMFSILEERRKVMT
QQIRSEEDEKVNHTQMLMRCYGDSMEANRKLLSSVESSMEELDMAEFVQNSKELISKVIA
ASGAGPSETLKPGYDSLSLYRFNFSKQEEMLRSIDFDKVVEDICEEPEVSPDPEEPKGPL
IQNTEPELCQEPLIPDRHALGEPAEEPLPPPISPPVEPLQLDELGADPEPAAPGPAAGSL
ESAGERLQPETEGPGSGDVGPGQVRVERKVERVGAEARQPVREESFRKDREGMNTQQIVT
LVFYLLALLVILLRFWSYIGCFMYL
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtctctgtcggccgacctcagctgcctccagagcagccagggcgcrgagcgcgaggcg
gcgctggcgtcgctggagaagcagctgatgtgtccgatctgcgccgacatcttcagcaag
ccggtcgtcatcctgccgtgtcaacacaacctgtgcaggaaatgcgccaacgagctttat
cagccatctttgttccacgccagaaccacgatgctggtgaacagcggccgtttccgctgt
ccgacctgcagacacgacgtggtgctggatcgccacggcgtctacggcctgcagaggaat
ctgctggtcgaaaacatcatcgatatctacaaacaggagctcaaccaaataccaagcccg
cctcctcttcctcctcctcttcctcctgctgaggcgacctgttctgatcatgaaggtgaa
aagttgaacatctactgcctcacctgccagcttcccacctgctctttctgtaaagtcttc
ggggcgcatcagaactgccgggtggctcctctgacggacgtccaccagcagaagaaggat
gagctgagcgaaggcatcagttctcttggggagtttagagacagagtccaggctctggtc
agtgacacagaagacacctgtagagccgtggaggagagcttcaagacccagaaacagaac
gtgtgtgacaagttcagcagcatgttttccatcctggaggaaagacggaaggttatgaca
caacaaatccgctctgaagaagacgagaaggtaaaccacacccagatgctgatgcgttgc
tatggcgacagcatggaggccaacaggaagctgttgtcaagcgtggagagcagcatggag
gagcttgacatggctgagtttgttcagaattcaaaagaattgatctctaaagtgattgca
gcgtccggcgccggtccatccgagactctgaaaccaggctatgacagtctgagtctctac
aggtttaattttagcaaacaggaagaaatgctgaggagcattgactttgacaaagttgta
gaagacatttgtgaagaaccagaagtcagtccagatccagaagaacccaaaggaccttta
atccagaacacagaaccagaactatgccaggagccgttaatcccggaccgtcatgctttg
ggagaaccggctgaagagccacttccacctcccatctctccaccagtggaaccattacag
cttgatgaactgggagctgacccagagcctgcagctcctggcccggcggccggttcttta
gagtctgctggagaacgtttgcagccggaaaccgaaggtccaggttccggtgacgttgga
ccgggtcaggttagggtggagagaaaggtggagcgggttggggccgaggcacggcagcct
gtgagagaggaaagcttcaggaaagaccgggaggggatgaacactcagcagattgtcaca
ctggtcttctatcttttggccttactggtcatcctgctgaggttctggtcctacatcggc
tgttttatgtacttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (25)   

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