KEGG   Poecilia reticulata (guppy): 103475064
Entry
103475064         CDS       T05149                                 
Symbol
nup88
Name
(RefSeq) nuclear pore complex protein Nup88
  KO
K14318  nuclear pore complex protein Nup88
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103475064 (nup88)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pret03019]
    103475064 (nup88)
Messenger RNA biogenesis [BR:pret03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103475064 (nup88)
SSDB
Motif
Pfam: Nup88 DUF6341
Other DBs
NCBI-GeneID: 103475064
NCBI-ProteinID: XP_008424681
UniProt: A0A3P9PQN8
Position
LG13:complement(29892092..29895676)
AA seq 720 aa
MFSQLIKMAAFCADRWLNDLPNHTIFKKIRERLDPESERNEKETAKNLTFCLGGDFFLWD
DSEGVFYTTNLRQLNSAESESSGKYQTLQCINPPLFQVCQLLLSPTQHLVALVGQRGVSV
LELPQRWGKRSEFEGGREEINCKTIPVAERFFTSSPSVKLRQAAWYPSETDEPHLVLLTS
DNTIRFYALKSPHTPAKVLPVSQSEDETSSLHPPVRSYAASLGEIAVAFDFGSASGPPRQ
LAAQCSKNQPVYPLYILYENGETYVSYTSYATGLSVSKPAGPLPMYPAAEDNYGYDACAV
LCLPCAPSILVIATETGMLYHCVVLECEEEEEWIRGSETVPALYVFECVELELTLRVAAE
EDEPQEFDFTCPIKLHRDPLCAQRYHCTHEAGVHSVGLIWLNKLQKFLQSNEEDKDSLQE
LAAEKRCIVEHILCTRPLPSRRSAPVRGFLIVSDLSLGATMICITSSYECIMLPLLSSIR
PPSPPLLCSDPGPGSASSPLRGLASDSFEQHIRSILARSSNNPMVLKAGDKEASTPPAEC
LQLLSRATQVFREEYIMKQDMAREEMERRVKLLTGQKVKQVEELASCREERKSLTEAAER
LADKYEDAKYRQEALMNRVKKVLCSLQSQLPVLSNSEKDMKKELQSVSDKLKHLDNCIRQ
VNTKLEYQKTQVDKEMSASKKAVPLSAQQKKVVQDVLREQGQHIGDMMKQIKDIKNHFSF
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgttcagccagttgatcaagatggcggcgttctgcgcagatcggtggctgaatgatttg
ccaaatcacactattttcaagaagatacgagagaggctggacccggagtccgagagaaat
gagaaggaaacggccaagaacctgacgttttgtctgggtggagactttttcctatgggac
gactctgaaggcgtgttttacaccacaaacctgcggcagctaaactccgcggagtccgaa
agcagcgggaagtaccagacgctccagtgcatcaacccgcctctgttccaggtgtgccag
ctgctgctgagccccacgcagcacctcgtcgcgctggtcggccagagaggggtttcggtt
ctggagctccctcagcggtgggggaagcggtccgagttcgagggcggccgggaagagata
aactgcaagaccatcccggtggcggagcgcttcttcaccagctccccgtcggtgaagctg
cgacaggcggcttggtacccgagcgaaaccgacgagccccacctggttctgctcacatcc
gacaataccatccgattctacgcgctgaagtcgccgcacacgccggccaaagtgctgccc
gtgtcgcagtcggaggatgaaaccagcagcctccacccgccggttcgctcctacgccgca
tctctgggagaaattgcagtcgccttcgacttcggttcggcttccggtcctccgcggcag
ctggcggcgcagtgctccaaaaaccaaccggtgtatcctctctacattctctatgaaaac
ggggaaacctacgtaagttacaccagctatgcaaccggcctcagcgtgagcaaaccggcc
ggaccactgcccatgtatcccgccgcggaggacaactacggctacgacgcatgcgcagtc
ttgtgcctgccatgcgcccccagcatcctggtgatcgccacggaaacggggatgctgtat
cactgcgtggtgctggagtgtgaggaggaggaggagtggatccgaggctcggagacggtt
ccggctctctacgtgtttgaatgcgtggagctggagctcacactcagagtggcagcggag
gaggacgagccgcaggaatttgatttcacctgccccatcaagctgcaccgggacccgctg
tgtgcgcagcggtaccactgcacccacgaggccggggtgcacagcgtggggctcatctgg
cttaacaagctgcagaagttcctccagtccaacgaggaggacaaggacagcctgcaggag
ctggccgcggagaagcgctgcatcgtggagcacatcctctgcacccggccgcttcctagc
cgccgctcggctccggtccgcggcttcctcatcgtgtctgacctctctctgggagccacc
atgatctgcatcacctccagctatgagtgcatcatgttgcccctgctcagctccattcgc
cctccctctccgccgctgctttgctccgatccgggtcccggttccgccagctcgcccctc
cgcggcctggctagcgactccttcgagcagcacatccgtagcatcctggcgcggagctcc
aacaaccccatggtgctgaaagctggtgacaaggaggcgtccacaccgccggcggagtgt
ctgcagctcctcagcagagccacgcaggtgttccgcgaggaatacatcatgaagcaggac
atggcacgcgaggagatggagaggagggtgaagctcctgacgggtcagaaggtcaagcag
gtggaggagctggcgtcatgccgggaggagaggaagagtctgacggaagcggcggagagg
ttggccgacaaatacgaagacgcaaagtatcgtcaggaggcgctgatgaatcgggtgaag
aaggttctgtgcagcctgcagagccagctgcccgtcctgtccaacagcgagaaggacatg
aagaaggagctgcagagcgtcagcgacaagctcaaacacctggacaactgcatccggcag
gtgaacaccaagctggagtaccagaagacgcaggtggacaaggagatgtccgcgtccaag
aaggccgtcccgctcagcgcgcagcagaagaaggtggtccaggacgtcctgagggagcag
ggacagcatatcggagacatgatgaagcaaatcaaagacatcaaaaatcatttcagcttc
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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